Hb_001492_020

Information

Type -
Description -
Location Contig1492: 87646-103362
Sequence    

Annotation

kegg
ID rcu:RCOM_0729660
description diacylglycerol kinase, alpha, putative (EC:2.7.1.107)
nr
ID XP_012077476.1
description PREDICTED: diacylglycerol kinase 3-like [Jatropha curcas]
swissprot
ID Q1PDI2
description Diacylglycerol kinase 4 OS=Arabidopsis thaliana GN=DGK4 PE=2 SV=1
trembl
ID A0A067KR19
description Diacylglycerol kinase OS=Jatropha curcas GN=JCGZ_07810 PE=3 SV=1
Gene Ontology
ID GO:0004143
description diacylglycerol kinase 7-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12417: 97155-97363 , PASA_asmbl_12418: 82501-103357
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001492_020 0.0 - - PREDICTED: diacylglycerol kinase 3-like [Jatropha curcas]
2 Hb_002235_170 0.0491990463 - - hypothetical protein CISIN_1g010208mg [Citrus sinensis]
3 Hb_002213_070 0.0575567032 - - epsilon-adaptin family protein [Populus trichocarpa]
4 Hb_000640_120 0.0622874516 - - PREDICTED: uncharacterized protein LOC105642625 [Jatropha curcas]
5 Hb_007336_010 0.0739916814 - - PREDICTED: F-box protein At1g47056-like [Jatropha curcas]
6 Hb_000120_060 0.0741854846 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-1 [Populus euphratica]
7 Hb_001314_010 0.0764635489 - - PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Jatropha curcas]
8 Hb_000862_030 0.0766472622 - - PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U protein-like isoform X1 [Jatropha curcas]
9 Hb_000127_040 0.0780635541 - - PREDICTED: protein S-acyltransferase 8-like [Jatropha curcas]
10 Hb_001635_090 0.0802360786 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 7 isoform X1 [Populus euphratica]
11 Hb_028512_020 0.0825959439 - - PREDICTED: protein S-acyltransferase 11 isoform X2 [Jatropha curcas]
12 Hb_001860_030 0.0847573281 - - PREDICTED: cleavage stimulation factor subunit 77 isoform X5 [Jatropha curcas]
13 Hb_001677_080 0.0855765413 - - mannose-1-phosphate guanyltransferase, putative [Ricinus communis]
14 Hb_000789_310 0.0856278006 - - PREDICTED: E3 ubiquitin-protein ligase PRT1 [Jatropha curcas]
15 Hb_010142_030 0.0874683726 - - PREDICTED: isoamylase 3, chloroplastic isoform X2 [Jatropha curcas]
16 Hb_002662_020 0.0876083913 - - PREDICTED: F-box protein At1g47056-like [Jatropha curcas]
17 Hb_007638_030 0.0877535491 - - PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN [Jatropha curcas]
18 Hb_002110_190 0.0879451495 - - PREDICTED: pentatricopeptide repeat-containing protein At5g27460 [Jatropha curcas]
19 Hb_000159_090 0.0891247305 - - hypothetical protein POPTR_0015s153201g, partial [Populus trichocarpa]
20 Hb_105328_020 0.0893024094 - - PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN [Jatropha curcas]

Gene co-expression network

sample Hb_001492_020 Hb_001492_020 Hb_002235_170 Hb_002235_170 Hb_001492_020--Hb_002235_170 Hb_002213_070 Hb_002213_070 Hb_001492_020--Hb_002213_070 Hb_000640_120 Hb_000640_120 Hb_001492_020--Hb_000640_120 Hb_007336_010 Hb_007336_010 Hb_001492_020--Hb_007336_010 Hb_000120_060 Hb_000120_060 Hb_001492_020--Hb_000120_060 Hb_001314_010 Hb_001314_010 Hb_001492_020--Hb_001314_010 Hb_002235_170--Hb_001314_010 Hb_105328_020 Hb_105328_020 Hb_002235_170--Hb_105328_020 Hb_000127_040 Hb_000127_040 Hb_002235_170--Hb_000127_040 Hb_000862_030 Hb_000862_030 Hb_002235_170--Hb_000862_030 Hb_002235_170--Hb_002213_070 Hb_002213_070--Hb_000127_040 Hb_000613_050 Hb_000613_050 Hb_002213_070--Hb_000613_050 Hb_002110_190 Hb_002110_190 Hb_002213_070--Hb_002110_190 Hb_000789_310 Hb_000789_310 Hb_002213_070--Hb_000789_310 Hb_000890_210 Hb_000890_210 Hb_002213_070--Hb_000890_210 Hb_000640_120--Hb_002235_170 Hb_000205_100 Hb_000205_100 Hb_000640_120--Hb_000205_100 Hb_000640_120--Hb_001314_010 Hb_002662_020 Hb_002662_020 Hb_000640_120--Hb_002662_020 Hb_100215_010 Hb_100215_010 Hb_000640_120--Hb_100215_010 Hb_007336_010--Hb_002235_170 Hb_001205_240 Hb_001205_240 Hb_007336_010--Hb_001205_240 Hb_000363_240 Hb_000363_240 Hb_007336_010--Hb_000363_240 Hb_000327_270 Hb_000327_270 Hb_007336_010--Hb_000327_270 Hb_001511_240 Hb_001511_240 Hb_007336_010--Hb_001511_240 Hb_003693_070 Hb_003693_070 Hb_000120_060--Hb_003693_070 Hb_000270_490 Hb_000270_490 Hb_000120_060--Hb_000270_490 Hb_010142_030 Hb_010142_030 Hb_000120_060--Hb_010142_030 Hb_000808_280 Hb_000808_280 Hb_000120_060--Hb_000808_280 Hb_002783_240 Hb_002783_240 Hb_000120_060--Hb_002783_240 Hb_001617_060 Hb_001617_060 Hb_001314_010--Hb_001617_060 Hb_000083_160 Hb_000083_160 Hb_001314_010--Hb_000083_160 Hb_001314_010--Hb_100215_010 Hb_001635_090 Hb_001635_090 Hb_001314_010--Hb_001635_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.0413 12.577 7.29602 19.3528 12.4673 19.5647
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
17.0631 8.69054 11.8675 15.4789 9.16601

CAGE analysis