Hb_000640_120

Information

Type -
Description -
Location Contig640: 91048-93887
Sequence    

Annotation

kegg
ID rcu:RCOM_1347140
description hypothetical protein
nr
ID XP_012082898.1
description PREDICTED: uncharacterized protein LOC105642625 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JWD8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14032 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52087: 91204-93822
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000640_120 0.0 - - PREDICTED: uncharacterized protein LOC105642625 [Jatropha curcas]
2 Hb_001492_020 0.0622874516 - - PREDICTED: diacylglycerol kinase 3-like [Jatropha curcas]
3 Hb_002235_170 0.0822998318 - - hypothetical protein CISIN_1g010208mg [Citrus sinensis]
4 Hb_000205_100 0.0906403298 - - PREDICTED: exportin-4 [Jatropha curcas]
5 Hb_001314_010 0.0920277932 - - PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Jatropha curcas]
6 Hb_002662_020 0.0924492403 - - PREDICTED: F-box protein At1g47056-like [Jatropha curcas]
7 Hb_100215_010 0.0934966513 - - PREDICTED: heterogeneous nuclear ribonucleoprotein R isoform X1 [Jatropha curcas]
8 Hb_000347_180 0.0934994358 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
9 Hb_002213_070 0.0941413987 - - epsilon-adaptin family protein [Populus trichocarpa]
10 Hb_000116_410 0.0947709322 - - hypothetical protein JCGZ_22416 [Jatropha curcas]
11 Hb_002255_030 0.0989830138 - - PREDICTED: INO80 complex subunit D-like [Jatropha curcas]
12 Hb_000120_060 0.0997003263 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-1 [Populus euphratica]
13 Hb_007336_010 0.1006566876 - - PREDICTED: F-box protein At1g47056-like [Jatropha curcas]
14 Hb_000613_050 0.1011961387 - - PREDICTED: uncharacterized protein LOC105641544 isoform X2 [Jatropha curcas]
15 Hb_004689_050 0.1027770349 - - conserved hypothetical protein [Ricinus communis]
16 Hb_099878_030 0.1036904242 - - PREDICTED: coiled-coil domain-containing protein R3HCC1L isoform X4 [Jatropha curcas]
17 Hb_001635_090 0.1040154795 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 7 isoform X1 [Populus euphratica]
18 Hb_001677_080 0.1058135217 - - mannose-1-phosphate guanyltransferase, putative [Ricinus communis]
19 Hb_000890_210 0.1059580286 - - PREDICTED: serine/threonine-protein kinase PBS1 isoform X1 [Eucalyptus grandis]
20 Hb_001178_070 0.1068646746 - - PREDICTED: BTB/POZ domain-containing protein FBL11 [Jatropha curcas]

Gene co-expression network

sample Hb_000640_120 Hb_000640_120 Hb_001492_020 Hb_001492_020 Hb_000640_120--Hb_001492_020 Hb_002235_170 Hb_002235_170 Hb_000640_120--Hb_002235_170 Hb_000205_100 Hb_000205_100 Hb_000640_120--Hb_000205_100 Hb_001314_010 Hb_001314_010 Hb_000640_120--Hb_001314_010 Hb_002662_020 Hb_002662_020 Hb_000640_120--Hb_002662_020 Hb_100215_010 Hb_100215_010 Hb_000640_120--Hb_100215_010 Hb_001492_020--Hb_002235_170 Hb_002213_070 Hb_002213_070 Hb_001492_020--Hb_002213_070 Hb_007336_010 Hb_007336_010 Hb_001492_020--Hb_007336_010 Hb_000120_060 Hb_000120_060 Hb_001492_020--Hb_000120_060 Hb_001492_020--Hb_001314_010 Hb_002235_170--Hb_001314_010 Hb_105328_020 Hb_105328_020 Hb_002235_170--Hb_105328_020 Hb_000127_040 Hb_000127_040 Hb_002235_170--Hb_000127_040 Hb_000862_030 Hb_000862_030 Hb_002235_170--Hb_000862_030 Hb_002235_170--Hb_002213_070 Hb_000193_190 Hb_000193_190 Hb_000205_100--Hb_000193_190 Hb_001946_010 Hb_001946_010 Hb_000205_100--Hb_001946_010 Hb_000225_040 Hb_000225_040 Hb_000205_100--Hb_000225_040 Hb_000613_050 Hb_000613_050 Hb_000205_100--Hb_000613_050 Hb_004689_050 Hb_004689_050 Hb_000205_100--Hb_004689_050 Hb_001178_070 Hb_001178_070 Hb_000205_100--Hb_001178_070 Hb_001617_060 Hb_001617_060 Hb_001314_010--Hb_001617_060 Hb_000083_160 Hb_000083_160 Hb_001314_010--Hb_000083_160 Hb_001314_010--Hb_100215_010 Hb_001635_090 Hb_001635_090 Hb_001314_010--Hb_001635_090 Hb_005269_040 Hb_005269_040 Hb_002662_020--Hb_005269_040 Hb_032808_030 Hb_032808_030 Hb_002662_020--Hb_032808_030 Hb_004143_040 Hb_004143_040 Hb_002662_020--Hb_004143_040 Hb_000116_410 Hb_000116_410 Hb_002662_020--Hb_000116_410 Hb_002026_210 Hb_002026_210 Hb_002662_020--Hb_002026_210 Hb_000347_180 Hb_000347_180 Hb_002662_020--Hb_000347_180 Hb_000983_150 Hb_000983_150 Hb_100215_010--Hb_000983_150 Hb_000300_440 Hb_000300_440 Hb_100215_010--Hb_000300_440 Hb_100215_010--Hb_004689_050 Hb_003362_070 Hb_003362_070 Hb_100215_010--Hb_003362_070 Hb_000023_190 Hb_000023_190 Hb_100215_010--Hb_000023_190 Hb_000343_030 Hb_000343_030 Hb_100215_010--Hb_000343_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
19.1704 17.4506 5.59841 24.0819 17.8223 25.7101
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
23.4776 11.0932 13.0749 24.1607 12.6675

CAGE analysis