Hb_138455_010

Information

Type -
Description -
Location Contig138455: 75-1873
Sequence    

Annotation

kegg
ID rcu:RCOM_0699950
description UDP-glucosyltransferase, putative (EC:2.4.1.121)
nr
ID XP_002520220.1
description UDP-glucosyltransferase, putative [Ricinus communis]
swissprot
ID O48676
description UDP-glycosyltransferase 74B1 OS=Arabidopsis thaliana GN=UGT74B1 PE=1 SV=1
trembl
ID B9S2K1
description UDP-glucosyltransferase, putative OS=Ricinus communis GN=RCOM_0699950 PE=4 SV=1
Gene Ontology
ID GO:0047215
description udp-glycosyltransferase 74b1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10541: 100-1864 , PASA_asmbl_10542: 127-1863
cDNA
(Sanger)
(ID:Location)		 032_C16.ab1: 1216-1863 , 034_E14.ab1: 972-1864

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_138455_010 0.0 - - UDP-glucosyltransferase, putative [Ricinus communis]
2 Hb_000816_230 0.1180620365 - - PREDICTED: adenine/guanine permease AZG1 [Jatropha curcas]
3 Hb_012053_010 0.1253187187 - - srpk, putative [Ricinus communis]
4 Hb_002105_030 0.1345834944 - - -
5 Hb_012053_050 0.1533752893 - - PREDICTED: UDP-D-apiose/UDP-D-xylose synthase 2 [Jatropha curcas]
6 Hb_000878_020 0.1562598537 - - PREDICTED: uncharacterized protein LOC105629937 [Jatropha curcas]
7 Hb_001386_050 0.1567342648 - - PREDICTED: protein transport protein Sec61 subunit gamma-like [Jatropha curcas]
8 Hb_002344_070 0.1570988053 - - PREDICTED: proteasome subunit alpha type-6 [Jatropha curcas]
9 Hb_000110_170 0.1593322831 - - PREDICTED: arginine biosynthesis bifunctional protein ArgJ, chloroplastic isoform X1 [Jatropha curcas]
10 Hb_146225_010 0.1639600336 - - mitochondrial inner membrane protease subunit, putative [Ricinus communis]
11 Hb_002802_020 0.1686183119 - - PREDICTED: putative auxin efflux carrier component 5 [Jatropha curcas]
12 Hb_001863_420 0.1687191955 - - PREDICTED: probable protein phosphatase 2C 10, partial [Vitis vinifera]
13 Hb_001846_070 0.1706887343 - - PREDICTED: fructokinase-1 [Jatropha curcas]
14 Hb_003038_190 0.171315463 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105645961 [Jatropha curcas]
15 Hb_001776_170 0.1715004429 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000373_180 0.1736374051 transcription factor TF Family: Trihelix hypothetical protein JCGZ_25182 [Jatropha curcas]
17 Hb_002298_050 0.175090236 - - serine/threonine-protein kinase, putative [Ricinus communis]
18 Hb_001766_030 0.1768261729 - - hypothetical protein POPTR_0017s12640g [Populus trichocarpa]
19 Hb_001488_370 0.1785657757 - - Esterase PIR7B, putative [Ricinus communis]
20 Hb_001225_010 0.1788955084 - - unnamed protein product [Coffea canephora]

Gene co-expression network

sample Hb_138455_010 Hb_138455_010 Hb_000816_230 Hb_000816_230 Hb_138455_010--Hb_000816_230 Hb_012053_010 Hb_012053_010 Hb_138455_010--Hb_012053_010 Hb_002105_030 Hb_002105_030 Hb_138455_010--Hb_002105_030 Hb_012053_050 Hb_012053_050 Hb_138455_010--Hb_012053_050 Hb_000878_020 Hb_000878_020 Hb_138455_010--Hb_000878_020 Hb_001386_050 Hb_001386_050 Hb_138455_010--Hb_001386_050 Hb_000816_230--Hb_001386_050 Hb_000300_390 Hb_000300_390 Hb_000816_230--Hb_000300_390 Hb_000110_170 Hb_000110_170 Hb_000816_230--Hb_000110_170 Hb_000816_230--Hb_000878_020 Hb_146225_010 Hb_146225_010 Hb_000816_230--Hb_146225_010 Hb_012053_010--Hb_002105_030 Hb_002344_070 Hb_002344_070 Hb_012053_010--Hb_002344_070 Hb_012053_010--Hb_000878_020 Hb_003540_200 Hb_003540_200 Hb_012053_010--Hb_003540_200 Hb_001266_030 Hb_001266_030 Hb_012053_010--Hb_001266_030 Hb_012053_010--Hb_000110_170 Hb_002105_030--Hb_001386_050 Hb_001449_090 Hb_001449_090 Hb_002105_030--Hb_001449_090 Hb_002105_030--Hb_002344_070 Hb_002105_030--Hb_146225_010 Hb_000282_070 Hb_000282_070 Hb_002105_030--Hb_000282_070 Hb_001369_600 Hb_001369_600 Hb_012053_050--Hb_001369_600 Hb_001776_170 Hb_001776_170 Hb_012053_050--Hb_001776_170 Hb_000589_160 Hb_000589_160 Hb_012053_050--Hb_000589_160 Hb_000373_180 Hb_000373_180 Hb_012053_050--Hb_000373_180 Hb_002759_240 Hb_002759_240 Hb_012053_050--Hb_002759_240 Hb_001488_370 Hb_001488_370 Hb_012053_050--Hb_001488_370 Hb_006588_080 Hb_006588_080 Hb_000878_020--Hb_006588_080 Hb_000878_020--Hb_000110_170 Hb_000878_020--Hb_001386_050 Hb_008948_050 Hb_008948_050 Hb_000878_020--Hb_008948_050 Hb_000878_020--Hb_002344_070 Hb_000915_120 Hb_000915_120 Hb_000878_020--Hb_000915_120 Hb_001386_050--Hb_008948_050 Hb_001386_050--Hb_002344_070 Hb_000853_240 Hb_000853_240 Hb_001386_050--Hb_000853_240 Hb_001386_050--Hb_006588_080 Hb_000805_130 Hb_000805_130 Hb_001386_050--Hb_000805_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
97.3211 74.6505 19.68 89.4782 44.013 26.2526
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
183.977 845.562 331.38 30.4483 78.9106

CAGE analysis