Hb_116367_010

Information

Type -
Description -
Location Contig116367: 1092-1358
Sequence    

Annotation

kegg
ID pxb:103929526
description probable leucine-rich repeat receptor-like protein kinase At1g35710
nr
ID XP_009337010.1
description PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Pyrus x bretschneideri]
swissprot
ID Q9C9H7
description Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2
trembl
ID A0A067KEQ5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11135 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_116367_010 0.0 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Pyrus x bretschneideri]
2 Hb_003531_010 0.1901171906 - - scab resistance family protein [Populus trichocarpa]
3 Hb_003641_010 0.213875866 - - Pectinesterase-3 precursor, putative [Ricinus communis]
4 Hb_027287_010 0.2175106478 - - conserved hypothetical protein [Ricinus communis]
5 Hb_148658_010 0.2241417034 - - -
6 Hb_013040_010 0.2341021001 - - hypothetical protein POPTR_0009s09690g [Populus trichocarpa]
7 Hb_001660_140 0.2354489532 - - -
8 Hb_182507_010 0.2358252729 - - -
9 Hb_004907_030 0.2401549882 - - hypothetical protein POPTR_0012s032802g, partial [Populus trichocarpa]
10 Hb_106873_020 0.2431873784 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
11 Hb_002078_190 0.2448095305 - - conserved hypothetical protein [Ricinus communis]
12 Hb_033312_110 0.2465221924 - - -
13 Hb_157968_010 0.2467177193 - - Disease resistance protein RPS5, putative [Ricinus communis]
14 Hb_005368_030 0.2493533496 - - -
15 Hb_000193_030 0.251769706 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas]
16 Hb_000270_540 0.2562054158 - - hypothetical protein JCGZ_11527 [Jatropha curcas]
17 Hb_009119_010 0.2625504275 - - -
18 Hb_000300_140 0.264905374 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
19 Hb_133648_010 0.2668219202 - - -
20 Hb_068804_060 0.2675675292 - - PREDICTED: ABC transporter G family member 17-like [Jatropha curcas]

Gene co-expression network

sample Hb_116367_010 Hb_116367_010 Hb_003531_010 Hb_003531_010 Hb_116367_010--Hb_003531_010 Hb_003641_010 Hb_003641_010 Hb_116367_010--Hb_003641_010 Hb_027287_010 Hb_027287_010 Hb_116367_010--Hb_027287_010 Hb_148658_010 Hb_148658_010 Hb_116367_010--Hb_148658_010 Hb_013040_010 Hb_013040_010 Hb_116367_010--Hb_013040_010 Hb_001660_140 Hb_001660_140 Hb_116367_010--Hb_001660_140 Hb_002081_180 Hb_002081_180 Hb_003531_010--Hb_002081_180 Hb_178711_010 Hb_178711_010 Hb_003531_010--Hb_178711_010 Hb_005127_040 Hb_005127_040 Hb_003531_010--Hb_005127_040 Hb_072290_010 Hb_072290_010 Hb_003531_010--Hb_072290_010 Hb_029622_070 Hb_029622_070 Hb_003531_010--Hb_029622_070 Hb_000085_120 Hb_000085_120 Hb_003641_010--Hb_000085_120 Hb_005263_010 Hb_005263_010 Hb_003641_010--Hb_005263_010 Hb_000025_220 Hb_000025_220 Hb_003641_010--Hb_000025_220 Hb_097783_010 Hb_097783_010 Hb_003641_010--Hb_097783_010 Hb_005368_030 Hb_005368_030 Hb_003641_010--Hb_005368_030 Hb_000733_260 Hb_000733_260 Hb_003641_010--Hb_000733_260 Hb_174547_010 Hb_174547_010 Hb_027287_010--Hb_174547_010 Hb_027287_010--Hb_148658_010 Hb_000193_030 Hb_000193_030 Hb_027287_010--Hb_000193_030 Hb_027287_010--Hb_002081_180 Hb_000066_180 Hb_000066_180 Hb_027287_010--Hb_000066_180 Hb_002078_190 Hb_002078_190 Hb_148658_010--Hb_002078_190 Hb_106873_020 Hb_106873_020 Hb_148658_010--Hb_106873_020 Hb_157968_010 Hb_157968_010 Hb_148658_010--Hb_157968_010 Hb_148658_010--Hb_000066_180 Hb_013040_010--Hb_001660_140 Hb_182507_010 Hb_182507_010 Hb_013040_010--Hb_182507_010 Hb_004907_030 Hb_004907_030 Hb_013040_010--Hb_004907_030 Hb_033312_110 Hb_033312_110 Hb_013040_010--Hb_033312_110 Hb_013040_010--Hb_005368_030 Hb_000270_540 Hb_000270_540 Hb_013040_010--Hb_000270_540 Hb_001660_140--Hb_182507_010 Hb_001660_140--Hb_005368_030 Hb_001660_140--Hb_004907_030 Hb_001660_140--Hb_000270_540 Hb_001660_140--Hb_033312_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.543636 0 2.6912 0 1.92568
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis