Hb_174547_010

Information

Type -
Description -
Location Contig174547: 432-662
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_174547_010 0.0 - - -
2 Hb_000836_100 0.192727571 - - conserved hypothetical protein [Ricinus communis]
3 Hb_027287_010 0.2072926148 - - conserved hypothetical protein [Ricinus communis]
4 Hb_106873_020 0.2769770937 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
5 Hb_000066_180 0.2904392976 - - hypothetical protein POPTR_0008s02710g [Populus trichocarpa]
6 Hb_007889_050 0.2999438457 - - Kynurenine formamidase [Gossypium arboreum]
7 Hb_002078_190 0.3021505443 - - conserved hypothetical protein [Ricinus communis]
8 Hb_148658_010 0.3054691569 - - -
9 Hb_111985_010 0.3092352417 - - -
10 Hb_000589_230 0.3105219283 - - unknown [Picea sitchensis]
11 Hb_002081_180 0.3122422889 - - hypothetical protein PRUPE_ppa006101mg [Prunus persica]
12 Hb_116367_010 0.3128688472 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Pyrus x bretschneideri]
13 Hb_001950_040 0.316093841 - - -
14 Hb_060054_010 0.3210249478 - - NADH-ubiquinone oxidoreductase subunit B17.2, putative [Ricinus communis]
15 Hb_157968_010 0.33136324 - - Disease resistance protein RPS5, putative [Ricinus communis]
16 Hb_002126_020 0.3342226068 - - ferrochelatase [Medicago truncatula]
17 Hb_000193_030 0.3384894344 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas]
18 Hb_000544_170 0.3444962294 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004958_040 0.3471650495 - - -
20 Hb_169329_010 0.352713328 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_174547_010 Hb_174547_010 Hb_000836_100 Hb_000836_100 Hb_174547_010--Hb_000836_100 Hb_027287_010 Hb_027287_010 Hb_174547_010--Hb_027287_010 Hb_106873_020 Hb_106873_020 Hb_174547_010--Hb_106873_020 Hb_000066_180 Hb_000066_180 Hb_174547_010--Hb_000066_180 Hb_007889_050 Hb_007889_050 Hb_174547_010--Hb_007889_050 Hb_002078_190 Hb_002078_190 Hb_174547_010--Hb_002078_190 Hb_111985_010 Hb_111985_010 Hb_000836_100--Hb_111985_010 Hb_000836_100--Hb_007889_050 Hb_001506_030 Hb_001506_030 Hb_000836_100--Hb_001506_030 Hb_044653_010 Hb_044653_010 Hb_000836_100--Hb_044653_010 Hb_003438_060 Hb_003438_060 Hb_000836_100--Hb_003438_060 Hb_148658_010 Hb_148658_010 Hb_027287_010--Hb_148658_010 Hb_116367_010 Hb_116367_010 Hb_027287_010--Hb_116367_010 Hb_000193_030 Hb_000193_030 Hb_027287_010--Hb_000193_030 Hb_002081_180 Hb_002081_180 Hb_027287_010--Hb_002081_180 Hb_027287_010--Hb_000066_180 Hb_000589_230 Hb_000589_230 Hb_106873_020--Hb_000589_230 Hb_060054_010 Hb_060054_010 Hb_106873_020--Hb_060054_010 Hb_003025_060 Hb_003025_060 Hb_106873_020--Hb_003025_060 Hb_106873_020--Hb_148658_010 Hb_081815_010 Hb_081815_010 Hb_106873_020--Hb_081815_010 Hb_005723_070 Hb_005723_070 Hb_106873_020--Hb_005723_070 Hb_001907_090 Hb_001907_090 Hb_000066_180--Hb_001907_090 Hb_000066_180--Hb_000193_030 Hb_000340_330 Hb_000340_330 Hb_000066_180--Hb_000340_330 Hb_005318_020 Hb_005318_020 Hb_000066_180--Hb_005318_020 Hb_000066_180--Hb_148658_010 Hb_094132_010 Hb_094132_010 Hb_000066_180--Hb_094132_010 Hb_007889_050--Hb_002078_190 Hb_000869_060 Hb_000869_060 Hb_007889_050--Hb_000869_060 Hb_000893_010 Hb_000893_010 Hb_007889_050--Hb_000893_010 Hb_072290_010 Hb_072290_010 Hb_007889_050--Hb_072290_010 Hb_007889_050--Hb_106873_020 Hb_001950_040 Hb_001950_040 Hb_007889_050--Hb_001950_040 Hb_157968_010 Hb_157968_010 Hb_002078_190--Hb_157968_010 Hb_002078_190--Hb_148658_010 Hb_001708_010 Hb_001708_010 Hb_002078_190--Hb_001708_010 Hb_002078_190--Hb_001950_040 Hb_002078_190--Hb_116367_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.89695 0 2.2367 0.782431 4.77782
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis