Hb_027287_010

Information

Type -
Description -
Location Contig27287: 7021-7791
Sequence    

Annotation

kegg
ID rcu:RCOM_1687250
description hypothetical protein
nr
ID XP_002509827.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RCE3
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1687250 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_027287_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_174547_010 0.2072926148 - - -
3 Hb_148658_010 0.2172887854 - - -
4 Hb_116367_010 0.2175106478 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Pyrus x bretschneideri]
5 Hb_000193_030 0.2444153674 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas]
6 Hb_002081_180 0.2584939272 - - hypothetical protein PRUPE_ppa006101mg [Prunus persica]
7 Hb_000066_180 0.2591574927 - - hypothetical protein POPTR_0008s02710g [Populus trichocarpa]
8 Hb_106873_020 0.2603779974 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
9 Hb_002078_190 0.268266438 - - conserved hypothetical protein [Ricinus communis]
10 Hb_094132_010 0.2722824997 - - hypothetical protein POPTR_0018s03360g [Populus trichocarpa]
11 Hb_157968_010 0.2892737675 - - Disease resistance protein RPS5, putative [Ricinus communis]
12 Hb_003531_010 0.2932567874 - - scab resistance family protein [Populus trichocarpa]
13 Hb_001810_020 0.2961753254 - - -
14 Hb_000671_040 0.3147527348 - - -
15 Hb_163132_010 0.3170201604 - - -
16 Hb_007356_010 0.3179007556 - - CTV.19 [Citrus trifoliata]
17 Hb_007290_020 0.3190788596 - - PREDICTED: subtilisin-like protease SBT4.14 [Jatropha curcas]
18 Hb_068804_060 0.3191126661 - - PREDICTED: ABC transporter G family member 17-like [Jatropha curcas]
19 Hb_000300_140 0.3204815426 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
20 Hb_000589_230 0.3234489008 - - unknown [Picea sitchensis]

Gene co-expression network

sample Hb_027287_010 Hb_027287_010 Hb_174547_010 Hb_174547_010 Hb_027287_010--Hb_174547_010 Hb_148658_010 Hb_148658_010 Hb_027287_010--Hb_148658_010 Hb_116367_010 Hb_116367_010 Hb_027287_010--Hb_116367_010 Hb_000193_030 Hb_000193_030 Hb_027287_010--Hb_000193_030 Hb_002081_180 Hb_002081_180 Hb_027287_010--Hb_002081_180 Hb_000066_180 Hb_000066_180 Hb_027287_010--Hb_000066_180 Hb_000836_100 Hb_000836_100 Hb_174547_010--Hb_000836_100 Hb_106873_020 Hb_106873_020 Hb_174547_010--Hb_106873_020 Hb_174547_010--Hb_000066_180 Hb_007889_050 Hb_007889_050 Hb_174547_010--Hb_007889_050 Hb_002078_190 Hb_002078_190 Hb_174547_010--Hb_002078_190 Hb_148658_010--Hb_002078_190 Hb_148658_010--Hb_106873_020 Hb_157968_010 Hb_157968_010 Hb_148658_010--Hb_157968_010 Hb_148658_010--Hb_000066_180 Hb_148658_010--Hb_116367_010 Hb_003531_010 Hb_003531_010 Hb_116367_010--Hb_003531_010 Hb_003641_010 Hb_003641_010 Hb_116367_010--Hb_003641_010 Hb_013040_010 Hb_013040_010 Hb_116367_010--Hb_013040_010 Hb_001660_140 Hb_001660_140 Hb_116367_010--Hb_001660_140 Hb_094132_010 Hb_094132_010 Hb_000193_030--Hb_094132_010 Hb_103093_010 Hb_103093_010 Hb_000193_030--Hb_103093_010 Hb_163132_010 Hb_163132_010 Hb_000193_030--Hb_163132_010 Hb_007356_010 Hb_007356_010 Hb_000193_030--Hb_007356_010 Hb_007290_020 Hb_007290_020 Hb_000193_030--Hb_007290_020 Hb_068804_060 Hb_068804_060 Hb_000193_030--Hb_068804_060 Hb_002081_180--Hb_003531_010 Hb_005127_040 Hb_005127_040 Hb_002081_180--Hb_005127_040 Hb_178711_010 Hb_178711_010 Hb_002081_180--Hb_178711_010 Hb_029622_070 Hb_029622_070 Hb_002081_180--Hb_029622_070 Hb_002081_180--Hb_116367_010 Hb_001907_090 Hb_001907_090 Hb_000066_180--Hb_001907_090 Hb_000066_180--Hb_000193_030 Hb_000340_330 Hb_000340_330 Hb_000066_180--Hb_000340_330 Hb_005318_020 Hb_005318_020 Hb_000066_180--Hb_005318_020 Hb_000066_180--Hb_094132_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0569665 0 0.0870441 0 0.17424
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis