Hb_001660_140

Information

Type -
Description -
Location Contig1660: 137226-139492
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001660_140 0.0 - - -
2 Hb_182507_010 0.0033637657 - - -
3 Hb_013040_010 0.0219288904 - - hypothetical protein POPTR_0009s09690g [Populus trichocarpa]
4 Hb_005368_030 0.0622437936 - - -
5 Hb_004907_030 0.0814941706 - - hypothetical protein POPTR_0012s032802g, partial [Populus trichocarpa]
6 Hb_000270_540 0.1049768514 - - hypothetical protein JCGZ_11527 [Jatropha curcas]
7 Hb_033312_110 0.1057806412 - - -
8 Hb_005263_010 0.129776734 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170 [Nicotiana sylvestris]
9 Hb_000300_140 0.1537035449 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
10 Hb_068804_060 0.1594361914 - - PREDICTED: ABC transporter G family member 17-like [Jatropha curcas]
11 Hb_007290_020 0.159582511 - - PREDICTED: subtilisin-like protease SBT4.14 [Jatropha curcas]
12 Hb_007356_010 0.164845394 - - CTV.19 [Citrus trifoliata]
13 Hb_163132_010 0.1690148375 - - -
14 Hb_009119_010 0.1778626444 - - -
15 Hb_009803_010 0.188312963 - - hypothetical protein JCGZ_08257 [Jatropha curcas]
16 Hb_005723_070 0.2022720763 - - hypothetical protein CISIN_1g011514mg [Citrus sinensis]
17 Hb_000025_220 0.2254363697 - - hypothetical protein POPTR_0001s28080g [Populus trichocarpa]
18 Hb_002972_060 0.2306351071 transcription factor TF Family: M-type mads box protein, putative [Ricinus communis]
19 Hb_116367_010 0.2354489532 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Pyrus x bretschneideri]
20 Hb_000025_080 0.2375190162 - - -

Gene co-expression network

sample Hb_001660_140 Hb_001660_140 Hb_182507_010 Hb_182507_010 Hb_001660_140--Hb_182507_010 Hb_013040_010 Hb_013040_010 Hb_001660_140--Hb_013040_010 Hb_005368_030 Hb_005368_030 Hb_001660_140--Hb_005368_030 Hb_004907_030 Hb_004907_030 Hb_001660_140--Hb_004907_030 Hb_000270_540 Hb_000270_540 Hb_001660_140--Hb_000270_540 Hb_033312_110 Hb_033312_110 Hb_001660_140--Hb_033312_110 Hb_182507_010--Hb_013040_010 Hb_182507_010--Hb_005368_030 Hb_182507_010--Hb_004907_030 Hb_182507_010--Hb_000270_540 Hb_182507_010--Hb_033312_110 Hb_013040_010--Hb_004907_030 Hb_013040_010--Hb_033312_110 Hb_013040_010--Hb_005368_030 Hb_013040_010--Hb_000270_540 Hb_005263_010 Hb_005263_010 Hb_005368_030--Hb_005263_010 Hb_005368_030--Hb_000270_540 Hb_005368_030--Hb_004907_030 Hb_004907_030--Hb_033312_110 Hb_000300_140 Hb_000300_140 Hb_004907_030--Hb_000300_140 Hb_068804_060 Hb_068804_060 Hb_004907_030--Hb_068804_060 Hb_007290_020 Hb_007290_020 Hb_004907_030--Hb_007290_020 Hb_000270_540--Hb_004907_030 Hb_000270_540--Hb_033312_110 Hb_033312_110--Hb_000300_140 Hb_033312_110--Hb_068804_060 Hb_033312_110--Hb_007290_020 Hb_007356_010 Hb_007356_010 Hb_033312_110--Hb_007356_010 Hb_163132_010 Hb_163132_010 Hb_033312_110--Hb_163132_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.023196 0 0.0146327
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis