Hb_005127_040

Information

Type -
Description -
Location Contig5127: 56230-57621
Sequence    

Annotation

kegg
ID rcu:RCOM_0801590
description Histidine-containing phosphotransfer protein, putative (EC:1.3.1.74)
nr
ID XP_002516529.1
description Histidine-containing phosphotransfer protein, putative [Ricinus communis]
swissprot
ID Q9LU15
description Histidine-containing phosphotransfer protein 4 OS=Arabidopsis thaliana GN=AHP4 PE=1 SV=2
trembl
ID B9RS10
description Histidine-containing phosphotransfer protein, putative OS=Ricinus communis GN=RCOM_0801590 PE=4 SV=1
Gene Ontology
ID GO:0005622
description histidine-containing phosphotransfer protein 4-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005127_040 0.0 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
2 Hb_002081_180 0.1809130611 - - hypothetical protein PRUPE_ppa006101mg [Prunus persica]
3 Hb_000304_040 0.1906932091 - - PREDICTED: nicotianamine synthase-like [Jatropha curcas]
4 Hb_004458_010 0.1993258973 - - PREDICTED: RING-H2 finger protein ATL78-like [Jatropha curcas]
5 Hb_003531_010 0.2158248197 - - scab resistance family protein [Populus trichocarpa]
6 Hb_178711_010 0.2198111664 - - hypothetical protein PHAVU_003G094000g [Phaseolus vulgaris]
7 Hb_000983_180 0.2217000751 - - cytochrome P450, putative [Ricinus communis]
8 Hb_001414_120 0.2273315983 - - Benzoate carboxyl methyltransferase, putative [Ricinus communis]
9 Hb_005839_070 0.2290799034 - - hypothetical protein POPTR_0013s08160g [Populus trichocarpa]
10 Hb_003453_070 0.2290824662 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor LEP [Jatropha curcas]
11 Hb_010374_010 0.2290843621 - - TMV resistance protein N, putative [Ricinus communis]
12 Hb_000770_020 0.2292762475 - - hypothetical protein POPTR_0001s39195g [Populus trichocarpa]
13 Hb_011045_020 0.2293249608 - - hypothetical protein CICLE_v100140161mg, partial [Citrus clementina]
14 Hb_000302_050 0.2293796523 - - -
15 Hb_126916_010 0.2294117113 - - PREDICTED: putative receptor-like protein kinase At3g47110, partial [Jatropha curcas]
16 Hb_001975_060 0.2294622936 - - hypothetical protein JCGZ_11079 [Jatropha curcas]
17 Hb_006856_060 0.2295998982 - - PREDICTED: E3 ubiquitin-protein ligase UPL5 [Jatropha curcas]
18 Hb_103659_010 0.2299924206 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004077_010 0.23006921 - - retinoblastoma-binding protein, putative [Ricinus communis]
20 Hb_061641_010 0.2303237544 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]

Gene co-expression network

sample Hb_005127_040 Hb_005127_040 Hb_002081_180 Hb_002081_180 Hb_005127_040--Hb_002081_180 Hb_000304_040 Hb_000304_040 Hb_005127_040--Hb_000304_040 Hb_004458_010 Hb_004458_010 Hb_005127_040--Hb_004458_010 Hb_003531_010 Hb_003531_010 Hb_005127_040--Hb_003531_010 Hb_178711_010 Hb_178711_010 Hb_005127_040--Hb_178711_010 Hb_000983_180 Hb_000983_180 Hb_005127_040--Hb_000983_180 Hb_002081_180--Hb_003531_010 Hb_002081_180--Hb_178711_010 Hb_029622_070 Hb_029622_070 Hb_002081_180--Hb_029622_070 Hb_027287_010 Hb_027287_010 Hb_002081_180--Hb_027287_010 Hb_116367_010 Hb_116367_010 Hb_002081_180--Hb_116367_010 Hb_001414_120 Hb_001414_120 Hb_000304_040--Hb_001414_120 Hb_000304_040--Hb_004458_010 Hb_003925_130 Hb_003925_130 Hb_000304_040--Hb_003925_130 Hb_001957_050 Hb_001957_050 Hb_000304_040--Hb_001957_050 Hb_000769_050 Hb_000769_050 Hb_000304_040--Hb_000769_050 Hb_000373_110 Hb_000373_110 Hb_000304_040--Hb_000373_110 Hb_004458_010--Hb_001414_120 Hb_004458_010--Hb_001957_050 Hb_005040_010 Hb_005040_010 Hb_004458_010--Hb_005040_010 Hb_003602_080 Hb_003602_080 Hb_004458_010--Hb_003602_080 Hb_006590_030 Hb_006590_030 Hb_004458_010--Hb_006590_030 Hb_003531_010--Hb_178711_010 Hb_003531_010--Hb_116367_010 Hb_072290_010 Hb_072290_010 Hb_003531_010--Hb_072290_010 Hb_003531_010--Hb_029622_070 Hb_178711_010--Hb_029622_070 Hb_178711_010--Hb_003925_130 Hb_178711_010--Hb_000304_040 Hb_048183_010 Hb_048183_010 Hb_178711_010--Hb_048183_010 Hb_000770_020 Hb_000770_020 Hb_000983_180--Hb_000770_020 Hb_011045_020 Hb_011045_020 Hb_000983_180--Hb_011045_020 Hb_010374_010 Hb_010374_010 Hb_000983_180--Hb_010374_010 Hb_005839_070 Hb_005839_070 Hb_000983_180--Hb_005839_070 Hb_000302_050 Hb_000302_050 Hb_000983_180--Hb_000302_050 Hb_126916_010 Hb_126916_010 Hb_000983_180--Hb_126916_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.448318 0 0.398271 0 0.0951809
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis