Hb_113906_010

Information

Type -
Description -
Location Contig113906: 49-490
Sequence    

Annotation

kegg
ID rcu:RCOM_0238060
description Potassium transporter, putative
nr
ID KDP27777.1
description hypothetical protein JCGZ_18857 [Jatropha curcas]
swissprot
ID Q9M7K4
description Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1
trembl
ID A0A067JV76
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18857 PE=4 SV=1
Gene Ontology
ID GO:0016021
description potassium transporter 5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_113906_010 0.0 - - hypothetical protein JCGZ_18857 [Jatropha curcas]
2 Hb_004942_020 0.1119850449 - - Potassium transporter, putative [Ricinus communis]
3 Hb_091433_040 0.1367314053 - - PREDICTED: josephin-like protein [Jatropha curcas]
4 Hb_012586_020 0.1497060802 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
5 Hb_005914_070 0.1616348083 - - conserved hypothetical protein [Ricinus communis]
6 Hb_012053_040 0.1633156986 - - PREDICTED: putative phospholipid:diacylglycerol acyltransferase 2 [Jatropha curcas]
7 Hb_003095_070 0.1667041925 - - hypothetical protein POPTR_0009s11230g [Populus trichocarpa]
8 Hb_058143_010 0.1761133363 - - hypothetical protein JCGZ_01992 [Jatropha curcas]
9 Hb_148850_010 0.1801983305 - - PREDICTED: potassium transporter 5-like [Jatropha curcas]
10 Hb_000352_180 0.1811729481 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002759_240 0.1835121849 - - hypothetical protein EUGRSUZ_E01319 [Eucalyptus grandis]
12 Hb_005841_040 0.1894524806 - - stress-induced hydrophobic peptide 1 [Hevea brasiliensis]
13 Hb_003060_030 0.1896086714 - - conserved hypothetical protein 16 [Hevea brasiliensis]
14 Hb_001776_170 0.1903663644 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000261_450 0.1911532693 - - Pectinesterase U1 precursor, putative [Ricinus communis]
16 Hb_000193_240 0.1933187019 - - hypothetical protein CISIN_1g0449881mg, partial [Citrus sinensis]
17 Hb_001511_140 0.1947210373 - - PREDICTED: RING-H2 finger protein ATL66 [Jatropha curcas]
18 Hb_000788_080 0.198789175 - - PREDICTED: uncharacterized protein LOC105629703 isoform X1 [Jatropha curcas]
19 Hb_002983_030 0.2022948953 desease resistance Gene Name: NB-ARC hypothetical protein CISIN_1g046124mg, partial [Citrus sinensis]
20 Hb_002478_020 0.2025074745 - - hypothetical protein POPTR_0010s19120g [Populus trichocarpa]

Gene co-expression network

sample Hb_113906_010 Hb_113906_010 Hb_004942_020 Hb_004942_020 Hb_113906_010--Hb_004942_020 Hb_091433_040 Hb_091433_040 Hb_113906_010--Hb_091433_040 Hb_012586_020 Hb_012586_020 Hb_113906_010--Hb_012586_020 Hb_005914_070 Hb_005914_070 Hb_113906_010--Hb_005914_070 Hb_012053_040 Hb_012053_040 Hb_113906_010--Hb_012053_040 Hb_003095_070 Hb_003095_070 Hb_113906_010--Hb_003095_070 Hb_058143_010 Hb_058143_010 Hb_004942_020--Hb_058143_010 Hb_004942_020--Hb_012586_020 Hb_002478_020 Hb_002478_020 Hb_004942_020--Hb_002478_020 Hb_000352_180 Hb_000352_180 Hb_004942_020--Hb_000352_180 Hb_001143_070 Hb_001143_070 Hb_004942_020--Hb_001143_070 Hb_091433_040--Hb_005914_070 Hb_000227_200 Hb_000227_200 Hb_091433_040--Hb_000227_200 Hb_000450_020 Hb_000450_020 Hb_091433_040--Hb_000450_020 Hb_000111_010 Hb_000111_010 Hb_091433_040--Hb_000111_010 Hb_000784_040 Hb_000784_040 Hb_091433_040--Hb_000784_040 Hb_010589_050 Hb_010589_050 Hb_012586_020--Hb_010589_050 Hb_039946_010 Hb_039946_010 Hb_012586_020--Hb_039946_010 Hb_012586_020--Hb_058143_010 Hb_002290_050 Hb_002290_050 Hb_012586_020--Hb_002290_050 Hb_012586_020--Hb_000352_180 Hb_003052_040 Hb_003052_040 Hb_005914_070--Hb_003052_040 Hb_005914_070--Hb_000227_200 Hb_005914_070--Hb_000111_010 Hb_001369_450 Hb_001369_450 Hb_005914_070--Hb_001369_450 Hb_007426_050 Hb_007426_050 Hb_012053_040--Hb_007426_050 Hb_001511_140 Hb_001511_140 Hb_012053_040--Hb_001511_140 Hb_000788_080 Hb_000788_080 Hb_012053_040--Hb_000788_080 Hb_001776_170 Hb_001776_170 Hb_012053_040--Hb_001776_170 Hb_012053_040--Hb_001143_070 Hb_012053_040--Hb_000111_010 Hb_001102_250 Hb_001102_250 Hb_003095_070--Hb_001102_250 Hb_001276_060 Hb_001276_060 Hb_003095_070--Hb_001276_060 Hb_003095_070--Hb_000788_080 Hb_005908_040 Hb_005908_040 Hb_003095_070--Hb_005908_040 Hb_011671_400 Hb_011671_400 Hb_003095_070--Hb_011671_400 Hb_072912_020 Hb_072912_020 Hb_003095_070--Hb_072912_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.80096 2.36539 0.193607 1.02072 8.4522 2.92177
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.1736 76.1336 66.2164 3.23504 0.346376

CAGE analysis