Hb_089100_050

Information

Type -
Description -
Location Contig89100: 13251-14995
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_089100_050 0.0 - - -
2 Hb_004942_010 0.1287349879 - - hypothetical protein AMTR_s00057p00201180 [Amborella trichopoda]
3 Hb_000103_030 0.1353917787 - - hypothetical protein VITISV_021700 [Vitis vinifera]
4 Hb_001348_230 0.1565862445 transcription factor TF Family: TRAF protein with unknown function [Ricinus communis]
5 Hb_105602_020 0.1642164472 - - PREDICTED: 60S ribosomal protein L19-1-like [Populus euphratica]
6 Hb_001143_070 0.1646651662 - - Acyl-CoA N-acyltransferases (NAT) superfamily protein isoform 1 [Theobroma cacao]
7 Hb_002989_040 0.1726680414 - - hypothetical protein 1 [Hevea brasiliensis]
8 Hb_004942_020 0.1805996184 - - Potassium transporter, putative [Ricinus communis]
9 Hb_001369_210 0.1869584351 transcription factor TF Family: C2H2 hypothetical protein JCGZ_26269 [Jatropha curcas]
10 Hb_000352_160 0.1874909363 - - conserved hypothetical protein [Ricinus communis]
11 Hb_012586_020 0.189596698 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]
12 Hb_038134_010 0.1910952338 - - -
13 Hb_001396_090 0.193484626 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 75 [Jatropha curcas]
14 Hb_010589_050 0.1975931003 - - -
15 Hb_002588_040 0.1996687011 - - Pathogenesis-related protein 1 [Theobroma cacao]
16 Hb_000450_020 0.204058051 - - conserved hypothetical protein [Ricinus communis]
17 Hb_004461_020 0.2083719588 - - PREDICTED: uncharacterized protein LOC104105697 [Nicotiana tomentosiformis]
18 Hb_001425_070 0.2095360632 - - -
19 Hb_000352_180 0.2099491474 - - conserved hypothetical protein [Ricinus communis]
20 Hb_007426_050 0.2108799662 transcription factor TF Family: Tify JAZ8 [Hevea brasiliensis]

Gene co-expression network

sample Hb_089100_050 Hb_089100_050 Hb_004942_010 Hb_004942_010 Hb_089100_050--Hb_004942_010 Hb_000103_030 Hb_000103_030 Hb_089100_050--Hb_000103_030 Hb_001348_230 Hb_001348_230 Hb_089100_050--Hb_001348_230 Hb_105602_020 Hb_105602_020 Hb_089100_050--Hb_105602_020 Hb_001143_070 Hb_001143_070 Hb_089100_050--Hb_001143_070 Hb_002989_040 Hb_002989_040 Hb_089100_050--Hb_002989_040 Hb_004942_010--Hb_000103_030 Hb_004942_010--Hb_105602_020 Hb_001258_140 Hb_001258_140 Hb_004942_010--Hb_001258_140 Hb_004942_020 Hb_004942_020 Hb_004942_010--Hb_004942_020 Hb_007576_030 Hb_007576_030 Hb_004942_010--Hb_007576_030 Hb_000103_030--Hb_105602_020 Hb_000103_030--Hb_001143_070 Hb_004461_020 Hb_004461_020 Hb_000103_030--Hb_004461_020 Hb_000103_030--Hb_002989_040 Hb_001425_070 Hb_001425_070 Hb_000103_030--Hb_001425_070 Hb_000352_160 Hb_000352_160 Hb_001348_230--Hb_000352_160 Hb_002588_040 Hb_002588_040 Hb_001348_230--Hb_002588_040 Hb_001369_210 Hb_001369_210 Hb_001348_230--Hb_001369_210 Hb_001146_060 Hb_001146_060 Hb_001348_230--Hb_001146_060 Hb_000563_260 Hb_000563_260 Hb_001348_230--Hb_000563_260 Hb_001348_230--Hb_001143_070 Hb_105602_020--Hb_002989_040 Hb_004064_020 Hb_004064_020 Hb_105602_020--Hb_004064_020 Hb_003913_050 Hb_003913_050 Hb_105602_020--Hb_003913_050 Hb_000920_320 Hb_000920_320 Hb_105602_020--Hb_000920_320 Hb_001143_070--Hb_002989_040 Hb_002290_050 Hb_002290_050 Hb_001143_070--Hb_002290_050 Hb_001143_070--Hb_004942_020 Hb_001143_070--Hb_000352_160 Hb_023051_020 Hb_023051_020 Hb_002989_040--Hb_023051_020 Hb_003226_240 Hb_003226_240 Hb_002989_040--Hb_003226_240 Hb_034482_040 Hb_034482_040 Hb_002989_040--Hb_034482_040 Hb_002989_040--Hb_000920_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.153788 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.767919 3.02518 1.71161 0.281149 0

CAGE analysis