Hb_072153_010

Information

Type -
Description -
Location Contig72153: 846-1193
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_012070035.1
description PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L719
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03435 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_072153_010 0.0 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
2 Hb_186495_010 0.1023884948 - - Phosphoprotein phosphatase [Theobroma cacao]
3 Hb_005736_110 0.1439859321 transcription factor TF Family: MYB MYB transcriptional factor [Populus tremula x Populus tremuloides]
4 Hb_000367_320 0.1588959325 - - conserved hypothetical protein [Ricinus communis]
5 Hb_034688_030 0.1633172785 - - PREDICTED: uncharacterized protein LOC105642049 [Jatropha curcas]
6 Hb_000069_630 0.179011999 - - hypothetical protein [Hevea brasiliensis]
7 Hb_000563_410 0.1796388925 - - hypothetical protein JCGZ_18917 [Jatropha curcas]
8 Hb_003126_120 0.187359699 - - PREDICTED: cytochrome b561 and DOMON domain-containing protein At5g47530-like [Jatropha curcas]
9 Hb_005396_030 0.190597374 - - conserved hypothetical protein [Ricinus communis]
10 Hb_005056_120 0.1913660571 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_002000_100 0.1923697883 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Jatropha curcas]
12 Hb_001016_040 0.1932349945 transcription factor TF Family: Orphans PREDICTED: histidine kinase 1 isoform X1 [Jatropha curcas]
13 Hb_002007_330 0.193372431 - - PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Jatropha curcas]
14 Hb_022597_010 0.1935812714 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 13 [Vitis vinifera]
15 Hb_000028_550 0.1953568586 - - unknown [Medicago truncatula]
16 Hb_001360_020 0.1959206359 - - PREDICTED: S-adenosylmethionine synthase 1 [Nelumbo nucifera]
17 Hb_000705_070 0.1961696794 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000087_190 0.1968791171 - - hypothetical protein CICLE_v10033278mg [Citrus clementina]
19 Hb_000705_050 0.1980964177 - - PREDICTED: uncharacterized protein C167.05 [Vitis vinifera]
20 Hb_001322_010 0.1993795012 - - PREDICTED: uncharacterized protein LOC105632322 [Jatropha curcas]

Gene co-expression network

sample Hb_072153_010 Hb_072153_010 Hb_186495_010 Hb_186495_010 Hb_072153_010--Hb_186495_010 Hb_005736_110 Hb_005736_110 Hb_072153_010--Hb_005736_110 Hb_000367_320 Hb_000367_320 Hb_072153_010--Hb_000367_320 Hb_034688_030 Hb_034688_030 Hb_072153_010--Hb_034688_030 Hb_000069_630 Hb_000069_630 Hb_072153_010--Hb_000069_630 Hb_000563_410 Hb_000563_410 Hb_072153_010--Hb_000563_410 Hb_001016_040 Hb_001016_040 Hb_186495_010--Hb_001016_040 Hb_186495_010--Hb_000069_630 Hb_186495_010--Hb_034688_030 Hb_005056_120 Hb_005056_120 Hb_186495_010--Hb_005056_120 Hb_186495_010--Hb_000367_320 Hb_002835_120 Hb_002835_120 Hb_005736_110--Hb_002835_120 Hb_006618_100 Hb_006618_100 Hb_005736_110--Hb_006618_100 Hb_145975_010 Hb_145975_010 Hb_005736_110--Hb_145975_010 Hb_011344_050 Hb_011344_050 Hb_005736_110--Hb_011344_050 Hb_103632_010 Hb_103632_010 Hb_005736_110--Hb_103632_010 Hb_005736_110--Hb_000367_320 Hb_003126_120 Hb_003126_120 Hb_000367_320--Hb_003126_120 Hb_000367_320--Hb_034688_030 Hb_002000_100 Hb_002000_100 Hb_000367_320--Hb_002000_100 Hb_022693_090 Hb_022693_090 Hb_000367_320--Hb_022693_090 Hb_001360_020 Hb_001360_020 Hb_000367_320--Hb_001360_020 Hb_034688_030--Hb_003126_120 Hb_002627_010 Hb_002627_010 Hb_034688_030--Hb_002627_010 Hb_001775_060 Hb_001775_060 Hb_034688_030--Hb_001775_060 Hb_002592_070 Hb_002592_070 Hb_034688_030--Hb_002592_070 Hb_034688_030--Hb_002000_100 Hb_000453_290 Hb_000453_290 Hb_034688_030--Hb_000453_290 Hb_000720_060 Hb_000720_060 Hb_000069_630--Hb_000720_060 Hb_000069_630--Hb_000563_410 Hb_135720_010 Hb_135720_010 Hb_000069_630--Hb_135720_010 Hb_000069_630--Hb_034688_030 Hb_000069_630--Hb_001775_060 Hb_000705_050 Hb_000705_050 Hb_000563_410--Hb_000705_050 Hb_000563_410--Hb_186495_010 Hb_000563_410--Hb_034688_030 Hb_007161_020 Hb_007161_020 Hb_000563_410--Hb_007161_020 Hb_080068_010 Hb_080068_010 Hb_000563_410--Hb_080068_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.34069 0.557877 18.0431 0.217804 1.29106
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.316825 2.40317 3.46376

CAGE analysis