Hb_000069_630

Information

Type -
Description -
Location Contig69: 692422-692661
Sequence    

Annotation

kegg
ID rcu:RCOM_0149730
description hypothetical protein
nr
ID AEW43293.1
description hypothetical protein [Hevea brasiliensis]
swissprot
ID -
description -
trembl
ID G9F9P4
description Uncharacterized protein OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54282: 692392-692910
cDNA
(Sanger)
(ID:Location)		 050_J10.ab1: 692392-692908

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000069_630 0.0 - - hypothetical protein [Hevea brasiliensis]
2 Hb_000720_060 0.1257979004 - - PREDICTED: BON1-associated protein 2-like [Jatropha curcas]
3 Hb_000563_410 0.1348234259 - - hypothetical protein JCGZ_18917 [Jatropha curcas]
4 Hb_135720_010 0.1396411511 - - hypothetical protein JCGZ_17857 [Jatropha curcas]
5 Hb_186495_010 0.1403448157 - - Phosphoprotein phosphatase [Theobroma cacao]
6 Hb_034688_030 0.1428759092 - - PREDICTED: uncharacterized protein LOC105642049 [Jatropha curcas]
7 Hb_001775_060 0.1469437179 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000203_150 0.1477012496 - - PREDICTED: uncharacterized protein LOC105116038 [Populus euphratica]
9 Hb_001610_060 0.1489113772 - - hypothetical protein TRIUR3_12067 [Triticum urartu]
10 Hb_000856_250 0.1565111649 - - short chain alcohol dehydrogenase, putative [Ricinus communis]
11 Hb_080068_010 0.1605599091 - - PREDICTED: basic 7S globulin-like [Jatropha curcas]
12 Hb_005056_120 0.1636576516 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_001013_060 0.1636917353 - - -
14 Hb_000705_050 0.1639063942 - - PREDICTED: uncharacterized protein C167.05 [Vitis vinifera]
15 Hb_002592_070 0.1645855059 - - hypothetical protein VITISV_020993 [Vitis vinifera]
16 Hb_016120_020 0.1661712209 - - PREDICTED: tetrahydrocannabinolic acid synthase-like [Jatropha curcas]
17 Hb_000367_320 0.1663822974 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001016_040 0.168539045 transcription factor TF Family: Orphans PREDICTED: histidine kinase 1 isoform X1 [Jatropha curcas]
19 Hb_000032_340 0.1685878194 - - PREDICTED: uncharacterized protein LOC105645669 [Jatropha curcas]
20 Hb_002627_010 0.1690947183 - - PREDICTED: uncharacterized protein LOC105640888 [Jatropha curcas]

Gene co-expression network

sample Hb_000069_630 Hb_000069_630 Hb_000720_060 Hb_000720_060 Hb_000069_630--Hb_000720_060 Hb_000563_410 Hb_000563_410 Hb_000069_630--Hb_000563_410 Hb_135720_010 Hb_135720_010 Hb_000069_630--Hb_135720_010 Hb_186495_010 Hb_186495_010 Hb_000069_630--Hb_186495_010 Hb_034688_030 Hb_034688_030 Hb_000069_630--Hb_034688_030 Hb_001775_060 Hb_001775_060 Hb_000069_630--Hb_001775_060 Hb_001610_060 Hb_001610_060 Hb_000720_060--Hb_001610_060 Hb_001013_060 Hb_001013_060 Hb_000720_060--Hb_001013_060 Hb_000203_150 Hb_000203_150 Hb_000720_060--Hb_000203_150 Hb_000720_060--Hb_001775_060 Hb_016120_020 Hb_016120_020 Hb_000720_060--Hb_016120_020 Hb_000705_050 Hb_000705_050 Hb_000563_410--Hb_000705_050 Hb_000563_410--Hb_186495_010 Hb_000563_410--Hb_034688_030 Hb_007161_020 Hb_007161_020 Hb_000563_410--Hb_007161_020 Hb_080068_010 Hb_080068_010 Hb_000563_410--Hb_080068_010 Hb_001728_130 Hb_001728_130 Hb_135720_010--Hb_001728_130 Hb_007625_030 Hb_007625_030 Hb_135720_010--Hb_007625_030 Hb_029866_080 Hb_029866_080 Hb_135720_010--Hb_029866_080 Hb_032260_130 Hb_032260_130 Hb_135720_010--Hb_032260_130 Hb_000325_010 Hb_000325_010 Hb_135720_010--Hb_000325_010 Hb_139461_010 Hb_139461_010 Hb_135720_010--Hb_139461_010 Hb_072153_010 Hb_072153_010 Hb_186495_010--Hb_072153_010 Hb_001016_040 Hb_001016_040 Hb_186495_010--Hb_001016_040 Hb_186495_010--Hb_034688_030 Hb_005056_120 Hb_005056_120 Hb_186495_010--Hb_005056_120 Hb_000367_320 Hb_000367_320 Hb_186495_010--Hb_000367_320 Hb_003126_120 Hb_003126_120 Hb_034688_030--Hb_003126_120 Hb_002627_010 Hb_002627_010 Hb_034688_030--Hb_002627_010 Hb_034688_030--Hb_001775_060 Hb_002592_070 Hb_002592_070 Hb_034688_030--Hb_002592_070 Hb_002000_100 Hb_002000_100 Hb_034688_030--Hb_002000_100 Hb_000453_290 Hb_000453_290 Hb_034688_030--Hb_000453_290 Hb_001775_060--Hb_002627_010 Hb_000705_070 Hb_000705_070 Hb_001775_060--Hb_000705_070 Hb_001775_060--Hb_003126_120 Hb_001775_060--Hb_002592_070 Hb_003582_010 Hb_003582_010 Hb_001775_060--Hb_003582_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.00396 163.108 26.8946 512.739 20.1584 9.28327
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.71558 0.569263 0 149.092 72.7219

CAGE analysis