Hb_034589_010

Information

Type -
Description -
Location Contig34589: 5185-6246
Sequence    

Annotation

kegg
ID sbi:SORBI_01g032130
description SORBIDRAFT_01g032130, Sb01g032130; hypothetical protein
nr
ID EYU18268.1
description hypothetical protein MIMGU_mgv1a020753mg, partial [Erythranthe guttata]
swissprot
ID -
description -
trembl
ID A0A022PTW9
description Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a020753mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_034589_010 0.0 - - hypothetical protein MIMGU_mgv1a020753mg, partial [Erythranthe guttata]
2 Hb_000230_310 0.0993587511 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
3 Hb_002740_070 0.2501602287 - - nitrate transporter, putative [Ricinus communis]
4 Hb_002217_410 0.2726852386 - - hypothetical protein L484_027883 [Morus notabilis]
5 Hb_000104_070 0.2805473396 - - PREDICTED: citrate-binding protein-like [Jatropha curcas]
6 Hb_071116_010 0.3085670144 - - PREDICTED: uncharacterized protein LOC105775124 [Gossypium raimondii]
7 Hb_006973_060 0.3105113852 - - Uncharacterized protein TCM_038475 [Theobroma cacao]
8 Hb_005181_200 0.323747519 transcription factor TF Family: GRAS PREDICTED: DELLA protein RGL1-like [Jatropha curcas]
9 Hb_000053_090 0.330223288 - - PREDICTED: clavaminate synthase-like protein At3g21360 [Populus euphratica]
10 Hb_072639_010 0.3302234649 - - JHL22C18.10 [Jatropha curcas]
11 Hb_008014_080 0.3302264723 - - PREDICTED: uncharacterized protein LOC103848614 [Brassica rapa]
12 Hb_000212_340 0.330232703 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000445_340 0.33024022 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000200_260 0.3302809446 - - PREDICTED: uncharacterized protein LOC104232531 isoform X2 [Nicotiana sylvestris]
15 Hb_003866_010 0.3304284259 - - Polyprotein, putative [Solanum demissum]
16 Hb_003492_030 0.3359666046 - - -
17 Hb_000163_120 0.3424664834 - - -
18 Hb_005016_180 0.3443411051 - - phosphoglycerate kinase, putative [Ricinus communis]
19 Hb_000866_350 0.3523499707 - - -
20 Hb_000465_200 0.3526600462 - - PREDICTED: protein NSP-INTERACTING KINASE 1 [Jatropha curcas]

Gene co-expression network

sample Hb_034589_010 Hb_034589_010 Hb_000230_310 Hb_000230_310 Hb_034589_010--Hb_000230_310 Hb_002740_070 Hb_002740_070 Hb_034589_010--Hb_002740_070 Hb_002217_410 Hb_002217_410 Hb_034589_010--Hb_002217_410 Hb_000104_070 Hb_000104_070 Hb_034589_010--Hb_000104_070 Hb_071116_010 Hb_071116_010 Hb_034589_010--Hb_071116_010 Hb_006973_060 Hb_006973_060 Hb_034589_010--Hb_006973_060 Hb_000230_310--Hb_002740_070 Hb_000230_310--Hb_071116_010 Hb_000230_310--Hb_002217_410 Hb_000553_070 Hb_000553_070 Hb_000230_310--Hb_000553_070 Hb_000230_310--Hb_000104_070 Hb_002740_070--Hb_071116_010 Hb_002740_070--Hb_000553_070 Hb_001862_080 Hb_001862_080 Hb_002740_070--Hb_001862_080 Hb_002228_130 Hb_002228_130 Hb_002740_070--Hb_002228_130 Hb_002217_410--Hb_000104_070 Hb_005016_180 Hb_005016_180 Hb_002217_410--Hb_005016_180 Hb_002217_410--Hb_001862_080 Hb_135569_010 Hb_135569_010 Hb_002217_410--Hb_135569_010 Hb_045985_010 Hb_045985_010 Hb_002217_410--Hb_045985_010 Hb_000104_070--Hb_005016_180 Hb_000104_070--Hb_001862_080 Hb_004994_360 Hb_004994_360 Hb_000104_070--Hb_004994_360 Hb_000104_070--Hb_045985_010 Hb_168241_010 Hb_168241_010 Hb_071116_010--Hb_168241_010 Hb_001628_060 Hb_001628_060 Hb_071116_010--Hb_001628_060 Hb_000556_030 Hb_000556_030 Hb_071116_010--Hb_000556_030 Hb_184109_010 Hb_184109_010 Hb_071116_010--Hb_184109_010 Hb_007017_050 Hb_007017_050 Hb_071116_010--Hb_007017_050 Hb_000723_070 Hb_000723_070 Hb_006973_060--Hb_000723_070 Hb_000302_070 Hb_000302_070 Hb_006973_060--Hb_000302_070 Hb_071379_010 Hb_071379_010 Hb_006973_060--Hb_071379_010 Hb_000105_110 Hb_000105_110 Hb_006973_060--Hb_000105_110 Hb_006973_060--Hb_184109_010 Hb_000866_350 Hb_000866_350 Hb_006973_060--Hb_000866_350
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0313785 0.017862 0.0393013 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis