Hb_032631_010

Information

Type -
Description -
Location Contig32631: 5364-5765
Sequence    

Annotation

kegg
ID rcu:RCOM_0467980
description hypothetical protein
nr
ID XP_012078027.1
description PREDICTED: uncharacterized protein LOC105638774 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KA66
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13048 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032631_010 0.0 - - PREDICTED: uncharacterized protein LOC105638774 [Jatropha curcas]
2 Hb_000597_110 0.1125516745 - - PREDICTED: VQ motif-containing protein 22-like [Jatropha curcas]
3 Hb_000220_160 0.13716224 - - hypothetical protein B456_003G184800 [Gossypium raimondii]
4 Hb_132880_030 0.1481451537 - - hypothetical protein JCGZ_10325 [Jatropha curcas]
5 Hb_001856_090 0.1534373169 - - Cellulose synthase-like B3, putative isoform 2 [Theobroma cacao]
6 Hb_001951_090 0.1686393696 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
7 Hb_006452_050 0.1737102976 - - PREDICTED: GABA transporter 1-like [Jatropha curcas]
8 Hb_000917_150 0.1836920457 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002315_070 0.1875187522 - - PREDICTED: uncharacterized protein LOC105630187 [Jatropha curcas]
10 Hb_001211_020 0.1898383409 transcription factor TF Family: MYB hypothetical protein POPTR_0002s11440g [Populus trichocarpa]
11 Hb_001952_110 0.1916266608 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
12 Hb_005511_050 0.1928407305 - - hypothetical protein POPTR_0008s04130g [Populus trichocarpa]
13 Hb_000251_100 0.1952456949 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
14 Hb_005550_070 0.1965372496 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 75 [Populus euphratica]
15 Hb_011628_030 0.1971002221 - - conserved hypothetical protein [Ricinus communis]
16 Hb_012019_020 0.1971118297 - - Nonspecific lipid-transfer protein precursor, putative [Ricinus communis]
17 Hb_047163_010 0.2002409016 - - PREDICTED: periaxin-like [Populus euphratica]
18 Hb_002234_150 0.2006988232 - - (S)-N-methylcoclaurine 3'-hydroxylase isozyme, putative [Ricinus communis]
19 Hb_059162_010 0.2014766137 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
20 Hb_003677_010 0.203236834 transcription factor TF Family: SRS PREDICTED: protein SHI RELATED SEQUENCE 1 [Jatropha curcas]

Gene co-expression network

sample Hb_032631_010 Hb_032631_010 Hb_000597_110 Hb_000597_110 Hb_032631_010--Hb_000597_110 Hb_000220_160 Hb_000220_160 Hb_032631_010--Hb_000220_160 Hb_132880_030 Hb_132880_030 Hb_032631_010--Hb_132880_030 Hb_001856_090 Hb_001856_090 Hb_032631_010--Hb_001856_090 Hb_001951_090 Hb_001951_090 Hb_032631_010--Hb_001951_090 Hb_006452_050 Hb_006452_050 Hb_032631_010--Hb_006452_050 Hb_001952_110 Hb_001952_110 Hb_000597_110--Hb_001952_110 Hb_000597_110--Hb_000220_160 Hb_000597_110--Hb_001951_090 Hb_003677_010 Hb_003677_010 Hb_000597_110--Hb_003677_010 Hb_000597_110--Hb_132880_030 Hb_000220_160--Hb_132880_030 Hb_002874_080 Hb_002874_080 Hb_000220_160--Hb_002874_080 Hb_005511_050 Hb_005511_050 Hb_000220_160--Hb_005511_050 Hb_031862_240 Hb_031862_240 Hb_000220_160--Hb_031862_240 Hb_132880_030--Hb_005511_050 Hb_000251_100 Hb_000251_100 Hb_132880_030--Hb_000251_100 Hb_006478_180 Hb_006478_180 Hb_132880_030--Hb_006478_180 Hb_001080_310 Hb_001080_310 Hb_132880_030--Hb_001080_310 Hb_112082_030 Hb_112082_030 Hb_132880_030--Hb_112082_030 Hb_001832_020 Hb_001832_020 Hb_001856_090--Hb_001832_020 Hb_001211_020 Hb_001211_020 Hb_001856_090--Hb_001211_020 Hb_001085_100 Hb_001085_100 Hb_001856_090--Hb_001085_100 Hb_001856_090--Hb_000597_110 Hb_001856_090--Hb_000220_160 Hb_001951_090--Hb_001952_110 Hb_002917_020 Hb_002917_020 Hb_001951_090--Hb_002917_020 Hb_008020_010 Hb_008020_010 Hb_001951_090--Hb_008020_010 Hb_000917_150 Hb_000917_150 Hb_001951_090--Hb_000917_150 Hb_002917_030 Hb_002917_030 Hb_001951_090--Hb_002917_030 Hb_012019_020 Hb_012019_020 Hb_001951_090--Hb_012019_020 Hb_006452_050--Hb_012019_020 Hb_002234_150 Hb_002234_150 Hb_006452_050--Hb_002234_150 Hb_006452_050--Hb_112082_030 Hb_000101_050 Hb_000101_050 Hb_006452_050--Hb_000101_050 Hb_000411_060 Hb_000411_060 Hb_006452_050--Hb_000411_060 Hb_000976_020 Hb_000976_020 Hb_006452_050--Hb_000976_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.18449 0.135851 0.152609 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.62015 0 5.24298 0

CAGE analysis