Hb_031862_240

Information

Type -
Description -
Location Contig31862: 222619-222957
Sequence    

Annotation

kegg
ID rcu:RCOM_0885330
description lipid binding protein, putative
nr
ID KDP40971.1
description hypothetical protein JCGZ_24970 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KXM6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24970 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031862_240 0.0 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
2 Hb_006478_190 0.0422071597 - - lipid binding protein, putative [Ricinus communis]
3 Hb_006124_010 0.0745266081 - - -
4 Hb_161981_020 0.0747952606 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_021931_030 0.075406946 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
6 Hb_176138_010 0.0755787591 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
7 Hb_006810_080 0.0756188143 - - hypothetical protein EUGRSUZ_C015472, partial [Eucalyptus grandis]
8 Hb_022693_100 0.076610647 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
9 Hb_000866_480 0.0768177484 - - -
10 Hb_110822_020 0.0783012241 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
11 Hb_002081_250 0.0784734724 - - hypothetical protein POPTR_0009s08940g [Populus trichocarpa]
12 Hb_170761_010 0.0785046987 - - PREDICTED: uncharacterized protein LOC105787794 [Gossypium raimondii]
13 Hb_000286_250 0.0786906599 desease resistance Gene Name: NB-ARC -
14 Hb_002200_010 0.0792541346 - - PREDICTED: sperm acrosomal protein FSA-ACR.1-like [Jatropha curcas]
15 Hb_009230_030 0.0793573566 - - -
16 Hb_000057_030 0.0794197149 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_000526_130 0.0821482424 - - PREDICTED: cytochrome P450 705A5-like [Jatropha curcas]
18 Hb_003724_030 0.0829780374 - - -
19 Hb_001504_290 0.0836318848 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
20 Hb_000329_410 0.084289804 - - Beta-expansin 3 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_031862_240 Hb_031862_240 Hb_006478_190 Hb_006478_190 Hb_031862_240--Hb_006478_190 Hb_006124_010 Hb_006124_010 Hb_031862_240--Hb_006124_010 Hb_161981_020 Hb_161981_020 Hb_031862_240--Hb_161981_020 Hb_021931_030 Hb_021931_030 Hb_031862_240--Hb_021931_030 Hb_176138_010 Hb_176138_010 Hb_031862_240--Hb_176138_010 Hb_006810_080 Hb_006810_080 Hb_031862_240--Hb_006810_080 Hb_000329_410 Hb_000329_410 Hb_006478_190--Hb_000329_410 Hb_006478_190--Hb_021931_030 Hb_006478_190--Hb_161981_020 Hb_110822_020 Hb_110822_020 Hb_006478_190--Hb_110822_020 Hb_002081_250 Hb_002081_250 Hb_006478_190--Hb_002081_250 Hb_006124_010--Hb_161981_020 Hb_006124_010--Hb_021931_030 Hb_006124_010--Hb_176138_010 Hb_006124_010--Hb_006810_080 Hb_022693_100 Hb_022693_100 Hb_006124_010--Hb_022693_100 Hb_000866_480 Hb_000866_480 Hb_006124_010--Hb_000866_480 Hb_161981_020--Hb_021931_030 Hb_161981_020--Hb_110822_020 Hb_161981_020--Hb_002081_250 Hb_170761_010 Hb_170761_010 Hb_161981_020--Hb_170761_010 Hb_161981_020--Hb_176138_010 Hb_021931_030--Hb_110822_020 Hb_021931_030--Hb_002081_250 Hb_021931_030--Hb_170761_010 Hb_000286_250 Hb_000286_250 Hb_021931_030--Hb_000286_250 Hb_176138_010--Hb_006810_080 Hb_176138_010--Hb_022693_100 Hb_176138_010--Hb_000866_480 Hb_009230_030 Hb_009230_030 Hb_176138_010--Hb_009230_030 Hb_006810_080--Hb_022693_100 Hb_006810_080--Hb_000866_480 Hb_006810_080--Hb_009230_030 Hb_006810_080--Hb_161981_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.21065 0.103247 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 7.01808 0

CAGE analysis