Hb_006124_010

Information

Type -
Description -
Location Contig6124: 12929-14013
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006124_010 0.0 - - -
2 Hb_161981_020 0.0067152279 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_021931_030 0.0118801472 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
4 Hb_176138_010 0.0122534225 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
5 Hb_006810_080 0.0124926944 - - hypothetical protein EUGRSUZ_C015472, partial [Eucalyptus grandis]
6 Hb_022693_100 0.0174470713 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
7 Hb_000866_480 0.018323087 - - -
8 Hb_110822_020 0.0244408203 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
9 Hb_002081_250 0.0249980027 - - hypothetical protein POPTR_0009s08940g [Populus trichocarpa]
10 Hb_170761_010 0.0250977979 - - PREDICTED: uncharacterized protein LOC105787794 [Gossypium raimondii]
11 Hb_000286_250 0.0256847646 desease resistance Gene Name: NB-ARC -
12 Hb_009230_030 0.026990372 - - -
13 Hb_002200_010 0.0273934466 - - PREDICTED: sperm acrosomal protein FSA-ACR.1-like [Jatropha curcas]
14 Hb_000057_030 0.027877595 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_000526_130 0.0343019923 - - PREDICTED: cytochrome P450 705A5-like [Jatropha curcas]
16 Hb_003724_030 0.0362362335 - - -
17 Hb_001504_290 0.037703963 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
18 Hb_011495_020 0.0399941585 - - Pectinesterase-2 precursor, putative [Ricinus communis]
19 Hb_000107_460 0.0445527312 - - PREDICTED: uncharacterized protein LOC104585930 [Nelumbo nucifera]
20 Hb_008159_030 0.0571534161 - - hypothetical protein B456_004G088300 [Gossypium raimondii]

Gene co-expression network

sample Hb_006124_010 Hb_006124_010 Hb_161981_020 Hb_161981_020 Hb_006124_010--Hb_161981_020 Hb_021931_030 Hb_021931_030 Hb_006124_010--Hb_021931_030 Hb_176138_010 Hb_176138_010 Hb_006124_010--Hb_176138_010 Hb_006810_080 Hb_006810_080 Hb_006124_010--Hb_006810_080 Hb_022693_100 Hb_022693_100 Hb_006124_010--Hb_022693_100 Hb_000866_480 Hb_000866_480 Hb_006124_010--Hb_000866_480 Hb_161981_020--Hb_021931_030 Hb_110822_020 Hb_110822_020 Hb_161981_020--Hb_110822_020 Hb_002081_250 Hb_002081_250 Hb_161981_020--Hb_002081_250 Hb_170761_010 Hb_170761_010 Hb_161981_020--Hb_170761_010 Hb_161981_020--Hb_176138_010 Hb_021931_030--Hb_110822_020 Hb_021931_030--Hb_002081_250 Hb_021931_030--Hb_170761_010 Hb_000286_250 Hb_000286_250 Hb_021931_030--Hb_000286_250 Hb_176138_010--Hb_006810_080 Hb_176138_010--Hb_022693_100 Hb_176138_010--Hb_000866_480 Hb_009230_030 Hb_009230_030 Hb_176138_010--Hb_009230_030 Hb_006810_080--Hb_022693_100 Hb_006810_080--Hb_000866_480 Hb_006810_080--Hb_009230_030 Hb_006810_080--Hb_161981_020 Hb_022693_100--Hb_000866_480 Hb_022693_100--Hb_009230_030 Hb_000526_130 Hb_000526_130 Hb_022693_100--Hb_000526_130 Hb_000866_480--Hb_009230_030 Hb_000866_480--Hb_000526_130 Hb_003724_030 Hb_003724_030 Hb_000866_480--Hb_003724_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.105939 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.335665 0

CAGE analysis