Hb_009230_030

Information

Type -
Description -
Location Contig9230: 43008-43261
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009230_030 0.0 - - -
2 Hb_000526_130 0.0073153616 - - PREDICTED: cytochrome P450 705A5-like [Jatropha curcas]
3 Hb_000866_480 0.0086697073 - - -
4 Hb_003724_030 0.0092508459 - - -
5 Hb_022693_100 0.0095458435 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
6 Hb_001504_290 0.0107195886 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
7 Hb_006810_080 0.0145004631 - - hypothetical protein EUGRSUZ_C015472, partial [Eucalyptus grandis]
8 Hb_176138_010 0.0147397276 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
9 Hb_000107_460 0.017573868 - - PREDICTED: uncharacterized protein LOC104585930 [Nelumbo nucifera]
10 Hb_006124_010 0.026990372 - - -
11 Hb_008159_030 0.0301879721 - - hypothetical protein B456_004G088300 [Gossypium raimondii]
12 Hb_161981_020 0.0337020218 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_021931_030 0.0388631639 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
14 Hb_072368_010 0.0398449638 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
15 Hb_004693_030 0.042481752 - - PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica]
16 Hb_005228_090 0.0451819657 - - PREDICTED: magnesium transporter MRS2-3-like [Citrus sinensis]
17 Hb_006364_010 0.0458262608 - - -
18 Hb_110822_020 0.0514107984 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
19 Hb_002081_250 0.0519672725 - - hypothetical protein POPTR_0009s08940g [Populus trichocarpa]
20 Hb_170761_010 0.0520669397 - - PREDICTED: uncharacterized protein LOC105787794 [Gossypium raimondii]

Gene co-expression network

sample Hb_009230_030 Hb_009230_030 Hb_000526_130 Hb_000526_130 Hb_009230_030--Hb_000526_130 Hb_000866_480 Hb_000866_480 Hb_009230_030--Hb_000866_480 Hb_003724_030 Hb_003724_030 Hb_009230_030--Hb_003724_030 Hb_022693_100 Hb_022693_100 Hb_009230_030--Hb_022693_100 Hb_001504_290 Hb_001504_290 Hb_009230_030--Hb_001504_290 Hb_006810_080 Hb_006810_080 Hb_009230_030--Hb_006810_080 Hb_000526_130--Hb_003724_030 Hb_000526_130--Hb_001504_290 Hb_000107_460 Hb_000107_460 Hb_000526_130--Hb_000107_460 Hb_000526_130--Hb_000866_480 Hb_000526_130--Hb_022693_100 Hb_000866_480--Hb_022693_100 Hb_000866_480--Hb_006810_080 Hb_176138_010 Hb_176138_010 Hb_000866_480--Hb_176138_010 Hb_000866_480--Hb_003724_030 Hb_003724_030--Hb_001504_290 Hb_003724_030--Hb_000107_460 Hb_003724_030--Hb_022693_100 Hb_022693_100--Hb_006810_080 Hb_022693_100--Hb_176138_010 Hb_006124_010 Hb_006124_010 Hb_022693_100--Hb_006124_010 Hb_001504_290--Hb_000107_460 Hb_001504_290--Hb_000866_480 Hb_008159_030 Hb_008159_030 Hb_001504_290--Hb_008159_030 Hb_006810_080--Hb_176138_010 Hb_006810_080--Hb_006124_010 Hb_161981_020 Hb_161981_020 Hb_006810_080--Hb_161981_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.560168 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.53355 0

CAGE analysis