Hb_017358_050

Information

Type -
Description -
Location Contig17358: 48016-48711
Sequence    

Annotation

kegg
ID pxb:103935423
description uncharacterized LOC103935423
nr
ID XP_012081528.1
description PREDICTED: uncharacterized protein LOC105641552 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K1B8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18496 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_017358_050 0.0 - - PREDICTED: uncharacterized protein LOC105641552 [Jatropha curcas]
2 Hb_007382_080 0.0382919546 - - glutaredoxin, grx, putative [Ricinus communis]
3 Hb_023771_030 0.128495787 - - unnamed protein product [Vitis vinifera]
4 Hb_006916_130 0.1320795047 - - PREDICTED: cytochrome P450 85A [Jatropha curcas]
5 Hb_000359_180 0.1378371598 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000077_300 0.1402175345 - - PREDICTED: expansin-B3-like [Jatropha curcas]
7 Hb_002217_060 0.1417971076 - - PREDICTED: polygalacturonase At1g48100 [Jatropha curcas]
8 Hb_000343_220 0.1485355208 - - hypothetical protein CISIN_1g037489mg [Citrus sinensis]
9 Hb_001473_060 0.152744091 - - PREDICTED: gibberellin 2-beta-dioxygenase 8 [Jatropha curcas]
10 Hb_003902_070 0.1531312243 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004330_040 0.1546045323 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002851_070 0.1554075749 - - PREDICTED: uncharacterized protein LOC105646410 [Jatropha curcas]
13 Hb_080147_070 0.1568696178 - - Rop5 [Hevea brasiliensis]
14 Hb_002757_010 0.1581825475 - - hypothetical protein POPTR_0013s10580g [Populus trichocarpa]
15 Hb_002700_030 0.1587413992 - - PREDICTED: serine carboxypeptidase-like 45 [Jatropha curcas]
16 Hb_001284_070 0.158750854 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001369_550 0.1618162298 - - 21 kDa protein precursor, putative [Ricinus communis]
18 Hb_006711_040 0.1624790779 - - PREDICTED: probable protein ABIL5 [Jatropha curcas]
19 Hb_000668_050 0.1647126331 - - phosphoglycerate mutase, putative [Ricinus communis]
20 Hb_001310_060 0.1654493627 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_017358_050 Hb_017358_050 Hb_007382_080 Hb_007382_080 Hb_017358_050--Hb_007382_080 Hb_023771_030 Hb_023771_030 Hb_017358_050--Hb_023771_030 Hb_006916_130 Hb_006916_130 Hb_017358_050--Hb_006916_130 Hb_000359_180 Hb_000359_180 Hb_017358_050--Hb_000359_180 Hb_000077_300 Hb_000077_300 Hb_017358_050--Hb_000077_300 Hb_002217_060 Hb_002217_060 Hb_017358_050--Hb_002217_060 Hb_000343_220 Hb_000343_220 Hb_007382_080--Hb_000343_220 Hb_000490_040 Hb_000490_040 Hb_007382_080--Hb_000490_040 Hb_003902_070 Hb_003902_070 Hb_007382_080--Hb_003902_070 Hb_007382_080--Hb_000077_300 Hb_007382_080--Hb_000359_180 Hb_002851_070 Hb_002851_070 Hb_023771_030--Hb_002851_070 Hb_023771_030--Hb_006916_130 Hb_023771_030--Hb_002217_060 Hb_012813_020 Hb_012813_020 Hb_023771_030--Hb_012813_020 Hb_009693_010 Hb_009693_010 Hb_023771_030--Hb_009693_010 Hb_003592_060 Hb_003592_060 Hb_023771_030--Hb_003592_060 Hb_006916_130--Hb_012813_020 Hb_006916_130--Hb_002851_070 Hb_005050_030 Hb_005050_030 Hb_006916_130--Hb_005050_030 Hb_002151_150 Hb_002151_150 Hb_006916_130--Hb_002151_150 Hb_002805_180 Hb_002805_180 Hb_000359_180--Hb_002805_180 Hb_000732_220 Hb_000732_220 Hb_000359_180--Hb_000732_220 Hb_001310_060 Hb_001310_060 Hb_000359_180--Hb_001310_060 Hb_000359_180--Hb_000077_300 Hb_004832_010 Hb_004832_010 Hb_000359_180--Hb_004832_010 Hb_004592_010 Hb_004592_010 Hb_000359_180--Hb_004592_010 Hb_002757_010 Hb_002757_010 Hb_000077_300--Hb_002757_010 Hb_002700_030 Hb_002700_030 Hb_000077_300--Hb_002700_030 Hb_000077_300--Hb_003902_070 Hb_000077_300--Hb_001310_060 Hb_080147_070 Hb_080147_070 Hb_000077_300--Hb_080147_070 Hb_000205_180 Hb_000205_180 Hb_000077_300--Hb_000205_180 Hb_001284_070 Hb_001284_070 Hb_002217_060--Hb_001284_070 Hb_002217_060--Hb_003592_060 Hb_020273_010 Hb_020273_010 Hb_002217_060--Hb_020273_010 Hb_002217_060--Hb_001310_060 Hb_002217_060--Hb_002851_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.824249 0.557114 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.417473 0.253417

CAGE analysis