Hb_016564_060

Information

Type -
Description -
Location Contig16564: 49202-50867
Sequence    

Annotation

kegg
ID sly:101254212
description uncharacterized LOC101254212
nr
ID XP_012065022.1
description PREDICTED: uncharacterized protein LOC105628249 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LI30
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05692 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15263: 49198-50536
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_016564_060 0.0 - - PREDICTED: uncharacterized protein LOC105628249 [Jatropha curcas]
2 Hb_001048_070 0.1048555796 transcription factor TF Family: HB hypothetical protein POPTR_0007s14590g [Populus trichocarpa]
3 Hb_003849_200 0.1183616282 - - PREDICTED: BTB/POZ domain-containing protein At1g67900-like isoform X1 [Citrus sinensis]
4 Hb_002811_110 0.1205036304 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
5 Hb_000162_070 0.1224321473 - - phospholipase C, putative [Ricinus communis]
6 Hb_034507_090 0.1281516118 - - PREDICTED: UPF0503 protein At3g09070, chloroplastic [Jatropha curcas]
7 Hb_000563_630 0.1302908334 - - PREDICTED: uncharacterized protein LOC105643442 [Jatropha curcas]
8 Hb_003025_150 0.1304134631 - - conserved hypothetical protein [Ricinus communis]
9 Hb_008725_020 0.1304903567 - - PREDICTED: cytidine deaminase 1 [Jatropha curcas]
10 Hb_000210_160 0.1371317274 - - PREDICTED: protein YLS9-like [Jatropha curcas]
11 Hb_000571_060 0.1377068446 - - PREDICTED: uncharacterized protein LOC105648112 [Jatropha curcas]
12 Hb_012787_060 0.1379488546 - - PREDICTED: glutathione S-transferase U17-like [Prunus mume]
13 Hb_000342_020 0.1384996826 - - bel1 homeotic protein, putative [Ricinus communis]
14 Hb_008021_040 0.1429352117 - - PREDICTED: AP2-like ethylene-responsive transcription factor ANT [Jatropha curcas]
15 Hb_001013_080 0.1437063246 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
16 Hb_001117_180 0.1439764696 - - PREDICTED: uncharacterized protein LOC105629703 isoform X1 [Jatropha curcas]
17 Hb_000991_080 0.1442055913 - - kinase, putative [Ricinus communis]
18 Hb_002324_040 0.1451715925 - - PREDICTED: subtilisin-like protease SBT1.6 [Jatropha curcas]
19 Hb_004659_100 0.1458454893 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001675_310 0.1472690726 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA27-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_016564_060 Hb_016564_060 Hb_001048_070 Hb_001048_070 Hb_016564_060--Hb_001048_070 Hb_003849_200 Hb_003849_200 Hb_016564_060--Hb_003849_200 Hb_002811_110 Hb_002811_110 Hb_016564_060--Hb_002811_110 Hb_000162_070 Hb_000162_070 Hb_016564_060--Hb_000162_070 Hb_034507_090 Hb_034507_090 Hb_016564_060--Hb_034507_090 Hb_000563_630 Hb_000563_630 Hb_016564_060--Hb_000563_630 Hb_012787_060 Hb_012787_060 Hb_001048_070--Hb_012787_060 Hb_001048_070--Hb_003849_200 Hb_008021_040 Hb_008021_040 Hb_001048_070--Hb_008021_040 Hb_002888_100 Hb_002888_100 Hb_001048_070--Hb_002888_100 Hb_002641_140 Hb_002641_140 Hb_001048_070--Hb_002641_140 Hb_000342_020 Hb_000342_020 Hb_001048_070--Hb_000342_020 Hb_001013_080 Hb_001013_080 Hb_003849_200--Hb_001013_080 Hb_008725_020 Hb_008725_020 Hb_003849_200--Hb_008725_020 Hb_003435_040 Hb_003435_040 Hb_003849_200--Hb_003435_040 Hb_000210_160 Hb_000210_160 Hb_003849_200--Hb_000210_160 Hb_004634_030 Hb_004634_030 Hb_003849_200--Hb_004634_030 Hb_000571_060 Hb_000571_060 Hb_002811_110--Hb_000571_060 Hb_000181_260 Hb_000181_260 Hb_002811_110--Hb_000181_260 Hb_001117_180 Hb_001117_180 Hb_002811_110--Hb_001117_180 Hb_002811_110--Hb_000162_070 Hb_007237_080 Hb_007237_080 Hb_002811_110--Hb_007237_080 Hb_002811_110--Hb_008021_040 Hb_026144_040 Hb_026144_040 Hb_000162_070--Hb_026144_040 Hb_008598_010 Hb_008598_010 Hb_000162_070--Hb_008598_010 Hb_000162_070--Hb_007237_080 Hb_000045_080 Hb_000045_080 Hb_000162_070--Hb_000045_080 Hb_000991_080 Hb_000991_080 Hb_000162_070--Hb_000991_080 Hb_034507_090--Hb_000563_630 Hb_001493_140 Hb_001493_140 Hb_034507_090--Hb_001493_140 Hb_000742_130 Hb_000742_130 Hb_034507_090--Hb_000742_130 Hb_034507_090--Hb_000210_160 Hb_000645_160 Hb_000645_160 Hb_034507_090--Hb_000645_160 Hb_000563_630--Hb_000210_160 Hb_000563_630--Hb_000742_130 Hb_006120_210 Hb_006120_210 Hb_000563_630--Hb_006120_210 Hb_000563_630--Hb_002888_100 Hb_000563_630--Hb_003849_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.525827 17.3261 10.8961 33.1683 0.163095 0.195485
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.150932 0 1.47408 10.1581 9.05346

CAGE analysis