Hb_012807_030

Information

Type -
Description -
Location Contig12807: 35627-37323
Sequence    

Annotation

kegg
ID rcu:RCOM_0472650
description hypothetical protein
nr
ID XP_012064741.1
description PREDICTED: uncharacterized protein LOC105628042 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L693
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05463 PE=4 SV=1
Gene Ontology
ID GO:0000023
description PREDICTED: uncharacterized protein LOC105628042 isoform X1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08676: 35555-39405 , PASA_asmbl_08677: 38154-38597
cDNA
(Sanger)
(ID:Location)		 052_P15.ab1: 35867-39364

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012807_030 0.0 - - PREDICTED: uncharacterized protein LOC105628042 isoform X1 [Jatropha curcas]
2 Hb_002762_050 0.0717904906 - - PREDICTED: uncharacterized protein LOC105640359 [Jatropha curcas]
3 Hb_124677_010 0.0840347378 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000002_140 0.0854866412 - - hypothetical protein JCGZ_02318 [Jatropha curcas]
5 Hb_000008_160 0.0867853899 - - carboxy-lyase, putative [Ricinus communis]
6 Hb_000866_060 0.0881580809 - - putative glycerol-3-phosphate acyltransferase [Vernicia fordii]
7 Hb_000128_040 0.0925147295 - - PREDICTED: uncharacterized protein LOC105641228 isoform X1 [Jatropha curcas]
8 Hb_002093_020 0.0929596998 - - hypothetical protein POPTR_0008s02960g [Populus trichocarpa]
9 Hb_004920_020 0.0970983238 - - hypothetical protein POPTR_0014s11700g [Populus trichocarpa]
10 Hb_001751_050 0.0990134537 - - PREDICTED: phytol kinase 1, chloroplastic [Jatropha curcas]
11 Hb_001409_080 0.0990941224 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X1 [Populus euphratica]
12 Hb_008143_010 0.099964033 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
13 Hb_004374_020 0.112094269 - - PREDICTED: mitogen-activated protein kinase homolog MMK2-like [Jatropha curcas]
14 Hb_002162_020 0.112251279 - - hypothetical protein JCGZ_21655 [Jatropha curcas]
15 Hb_087599_010 0.1144791237 - - PREDICTED: tropinone reductase homolog [Solanum tuberosum]
16 Hb_127263_010 0.1198811436 - - hypothetical protein JCGZ_02828 [Jatropha curcas]
17 Hb_002243_020 0.1236458653 - - PREDICTED: uncharacterized protein LOC105642097 isoform X1 [Jatropha curcas]
18 Hb_003777_080 0.1238361881 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like [Populus euphratica]
19 Hb_156093_010 0.1241393028 - - hypothetical protein RCOM_0504250 [Ricinus communis]
20 Hb_006267_040 0.1260144425 - - PREDICTED: ABC transporter G family member 32 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_012807_030 Hb_012807_030 Hb_002762_050 Hb_002762_050 Hb_012807_030--Hb_002762_050 Hb_124677_010 Hb_124677_010 Hb_012807_030--Hb_124677_010 Hb_000002_140 Hb_000002_140 Hb_012807_030--Hb_000002_140 Hb_000008_160 Hb_000008_160 Hb_012807_030--Hb_000008_160 Hb_000866_060 Hb_000866_060 Hb_012807_030--Hb_000866_060 Hb_000128_040 Hb_000128_040 Hb_012807_030--Hb_000128_040 Hb_087599_010 Hb_087599_010 Hb_002762_050--Hb_087599_010 Hb_002762_050--Hb_000008_160 Hb_000694_080 Hb_000694_080 Hb_002762_050--Hb_000694_080 Hb_003777_080 Hb_003777_080 Hb_002762_050--Hb_003777_080 Hb_156093_010 Hb_156093_010 Hb_002762_050--Hb_156093_010 Hb_101133_030 Hb_101133_030 Hb_124677_010--Hb_101133_030 Hb_124677_010--Hb_000866_060 Hb_015044_010 Hb_015044_010 Hb_124677_010--Hb_015044_010 Hb_000749_140 Hb_000749_140 Hb_124677_010--Hb_000749_140 Hb_124677_010--Hb_000128_040 Hb_002162_020 Hb_002162_020 Hb_000002_140--Hb_002162_020 Hb_001089_010 Hb_001089_010 Hb_000002_140--Hb_001089_010 Hb_140249_020 Hb_140249_020 Hb_000002_140--Hb_140249_020 Hb_000002_140--Hb_000008_160 Hb_000007_270 Hb_000007_270 Hb_000002_140--Hb_000007_270 Hb_002093_020 Hb_002093_020 Hb_000008_160--Hb_002093_020 Hb_000185_010 Hb_000185_010 Hb_000008_160--Hb_000185_010 Hb_001751_050 Hb_001751_050 Hb_000008_160--Hb_001751_050 Hb_002870_070 Hb_002870_070 Hb_000008_160--Hb_002870_070 Hb_000008_160--Hb_087599_010 Hb_006267_040 Hb_006267_040 Hb_000866_060--Hb_006267_040 Hb_127263_010 Hb_127263_010 Hb_000866_060--Hb_127263_010 Hb_000239_050 Hb_000239_050 Hb_000866_060--Hb_000239_050 Hb_000866_060--Hb_015044_010 Hb_001409_080 Hb_001409_080 Hb_000866_060--Hb_001409_080 Hb_000300_110 Hb_000300_110 Hb_000866_060--Hb_000300_110 Hb_001014_240 Hb_001014_240 Hb_000128_040--Hb_001014_240 Hb_000128_040--Hb_015044_010 Hb_000128_040--Hb_101133_030 Hb_000359_050 Hb_000359_050 Hb_000128_040--Hb_000359_050 Hb_023344_090 Hb_023344_090 Hb_000128_040--Hb_023344_090 Hb_000128_040--Hb_006267_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.359075 11.0613 2.56167 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.062243 0 1.39194 13.8138

CAGE analysis