Hb_012779_090

Information

Type -
Description -
Location Contig12779: 90549-97316
Sequence    

Annotation

kegg
ID pop:POPTR_0012s05750g
description POPTRDRAFT_823306; lipase family protein
nr
ID XP_012092976.1
description PREDICTED: lipase member N [Jatropha curcas]
swissprot
ID P80035
description Gastric triacylglycerol lipase OS=Canis familiaris GN=LIPF PE=1 SV=2
trembl
ID A0A067JKT4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05863 PE=4 SV=1
Gene Ontology
ID GO:0004806
description lipase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08523: 90371-90684 , PASA_asmbl_08524: 90557-97189 , PASA_asmbl_08525: 93075-95657 , PASA_asmbl_08526: 93884-94040
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012779_090 0.0 - - PREDICTED: lipase member N [Jatropha curcas]
2 Hb_162275_050 0.0300102568 - - PREDICTED: mRNA-capping enzyme [Jatropha curcas]
3 Hb_002798_070 0.0554111641 transcription factor TF Family: Jumonji PREDICTED: putative lysine-specific demethylase JMJ16 [Jatropha curcas]
4 Hb_000243_250 0.0594149133 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 44 [Jatropha curcas]
5 Hb_012194_030 0.0601586213 - - PREDICTED: R3H domain-containing protein 2-like isoform X1 [Jatropha curcas]
6 Hb_000395_130 0.0615376102 - - PREDICTED: N6-adenosine-methyltransferase MT-A70-like [Jatropha curcas]
7 Hb_001410_020 0.0623189519 - - cdk8, putative [Ricinus communis]
8 Hb_000172_430 0.0631507063 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003030_060 0.0675977231 - - PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 2-like [Jatropha curcas]
10 Hb_003464_090 0.0689975569 transcription factor TF Family: Trihelix PREDICTED: uncharacterized protein LOC105642342 [Jatropha curcas]
11 Hb_007765_110 0.0715220946 - - PREDICTED: zinc finger CCCH domain-containing protein 40-like [Jatropha curcas]
12 Hb_007163_120 0.0731189292 - - PREDICTED: COMPASS-like H3K4 histone methylase component WDR5A [Jatropha curcas]
13 Hb_000614_210 0.0741958006 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-1-like isoform X1 [Jatropha curcas]
14 Hb_001195_530 0.0748547139 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002217_170 0.0754966097 - - PREDICTED: E3 ubiquitin-protein ligase UPL6-like isoform X1 [Gossypium raimondii]
16 Hb_003835_070 0.0755645328 - - PREDICTED: uncharacterized protein LOC105641698 isoform X2 [Jatropha curcas]
17 Hb_000861_080 0.0761476182 - - PREDICTED: protein ELC-like [Jatropha curcas]
18 Hb_000049_260 0.0761914111 - - WD-repeat protein, putative [Ricinus communis]
19 Hb_000345_140 0.0763214146 - - PREDICTED: autophagy-related protein 18a-like [Jatropha curcas]
20 Hb_001838_060 0.076462378 transcription factor TF Family: bZIP PREDICTED: transcription factor HBP-1b(c38)-like isoform X3 [Jatropha curcas]

Gene co-expression network

sample Hb_012779_090 Hb_012779_090 Hb_162275_050 Hb_162275_050 Hb_012779_090--Hb_162275_050 Hb_002798_070 Hb_002798_070 Hb_012779_090--Hb_002798_070 Hb_000243_250 Hb_000243_250 Hb_012779_090--Hb_000243_250 Hb_012194_030 Hb_012194_030 Hb_012779_090--Hb_012194_030 Hb_000395_130 Hb_000395_130 Hb_012779_090--Hb_000395_130 Hb_001410_020 Hb_001410_020 Hb_012779_090--Hb_001410_020 Hb_162275_050--Hb_012194_030 Hb_000614_210 Hb_000614_210 Hb_162275_050--Hb_000614_210 Hb_162275_050--Hb_001410_020 Hb_003835_070 Hb_003835_070 Hb_162275_050--Hb_003835_070 Hb_003464_090 Hb_003464_090 Hb_162275_050--Hb_003464_090 Hb_002798_070--Hb_000243_250 Hb_002818_030 Hb_002818_030 Hb_002798_070--Hb_002818_030 Hb_002783_040 Hb_002783_040 Hb_002798_070--Hb_002783_040 Hb_002798_070--Hb_162275_050 Hb_000442_010 Hb_000442_010 Hb_002798_070--Hb_000442_010 Hb_002872_040 Hb_002872_040 Hb_000243_250--Hb_002872_040 Hb_011491_010 Hb_011491_010 Hb_000243_250--Hb_011491_010 Hb_012055_060 Hb_012055_060 Hb_000243_250--Hb_012055_060 Hb_000092_020 Hb_000092_020 Hb_000243_250--Hb_000092_020 Hb_000329_370 Hb_000329_370 Hb_012194_030--Hb_000329_370 Hb_002085_030 Hb_002085_030 Hb_012194_030--Hb_002085_030 Hb_012194_030--Hb_003835_070 Hb_010712_050 Hb_010712_050 Hb_012194_030--Hb_010712_050 Hb_000395_130--Hb_000092_020 Hb_001080_230 Hb_001080_230 Hb_000395_130--Hb_001080_230 Hb_000003_190 Hb_000003_190 Hb_000395_130--Hb_000003_190 Hb_000441_120 Hb_000441_120 Hb_000395_130--Hb_000441_120 Hb_006420_040 Hb_006420_040 Hb_000395_130--Hb_006420_040 Hb_000260_180 Hb_000260_180 Hb_001410_020--Hb_000260_180 Hb_000373_230 Hb_000373_230 Hb_001410_020--Hb_000373_230 Hb_006588_210 Hb_006588_210 Hb_001410_020--Hb_006588_210 Hb_000025_730 Hb_000025_730 Hb_001410_020--Hb_000025_730
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
18.6972 36.0003 21.2274 13.7281 25.7411 19.1526
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.8368 22.6467 22.046 20.1252 18.5855

CAGE analysis