Hb_011931_090

Information

Type -
Description -
Location Contig11931: 49016-50343
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011931_090 0.0 - - -
2 Hb_000405_010 0.0566147975 - - hypothetical protein JCGZ_15779 [Jatropha curcas]
3 Hb_000522_030 0.0803763574 - - hypothetical protein VITISV_006017 [Vitis vinifera]
4 Hb_150516_010 0.0951838734 - - PREDICTED: uncharacterized protein LOC104886268, partial [Beta vulgaris subsp. vulgaris]
5 Hb_005623_060 0.1222702838 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
6 Hb_014109_020 0.1271496141 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 53 [Jatropha curcas]
7 Hb_023386_030 0.1310784236 - - -
8 Hb_000432_020 0.1314988801 desease resistance Gene Name: Tropomyosin_1 PREDICTED: putative disease resistance protein RGA1 isoform X2 [Jatropha curcas]
9 Hb_015824_020 0.131753693 - - -
10 Hb_011892_010 0.135777755 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
11 Hb_004375_020 0.138607334 - - hypothetical protein VITISV_034560 [Vitis vinifera]
12 Hb_049285_010 0.1420910721 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
13 Hb_054127_020 0.14378316 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
14 Hb_027917_010 0.1467223009 - - PREDICTED: uncharacterized protein LOC103699089, partial [Phoenix dactylifera]
15 Hb_006356_030 0.1499087019 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
16 Hb_000923_110 0.1506254578 - - PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
17 Hb_000497_310 0.1519206172 - - conserved hypothetical protein [Ricinus communis]
18 Hb_005666_030 0.1540252469 - - PREDICTED: uncharacterized protein LOC103489421 [Cucumis melo]
19 Hb_004968_090 0.1560022421 - - PREDICTED: uncharacterized protein LOC104882781 [Vitis vinifera]
20 Hb_000476_030 0.1562665092 - - PREDICTED: uncharacterized protein LOC105629366 [Jatropha curcas]

Gene co-expression network

sample Hb_011931_090 Hb_011931_090 Hb_000405_010 Hb_000405_010 Hb_011931_090--Hb_000405_010 Hb_000522_030 Hb_000522_030 Hb_011931_090--Hb_000522_030 Hb_150516_010 Hb_150516_010 Hb_011931_090--Hb_150516_010 Hb_005623_060 Hb_005623_060 Hb_011931_090--Hb_005623_060 Hb_014109_020 Hb_014109_020 Hb_011931_090--Hb_014109_020 Hb_023386_030 Hb_023386_030 Hb_011931_090--Hb_023386_030 Hb_054127_020 Hb_054127_020 Hb_000405_010--Hb_054127_020 Hb_000432_020 Hb_000432_020 Hb_000405_010--Hb_000432_020 Hb_000405_010--Hb_000522_030 Hb_000405_010--Hb_150516_010 Hb_027917_010 Hb_027917_010 Hb_000405_010--Hb_027917_010 Hb_000522_030--Hb_150516_010 Hb_000476_030 Hb_000476_030 Hb_000522_030--Hb_000476_030 Hb_000522_030--Hb_005623_060 Hb_000135_080 Hb_000135_080 Hb_000522_030--Hb_000135_080 Hb_150516_010--Hb_005623_060 Hb_000346_050 Hb_000346_050 Hb_150516_010--Hb_000346_050 Hb_019654_170 Hb_019654_170 Hb_150516_010--Hb_019654_170 Hb_000512_050 Hb_000512_050 Hb_005623_060--Hb_000512_050 Hb_003169_040 Hb_003169_040 Hb_005623_060--Hb_003169_040 Hb_080033_020 Hb_080033_020 Hb_005623_060--Hb_080033_020 Hb_005623_060--Hb_014109_020 Hb_012528_040 Hb_012528_040 Hb_014109_020--Hb_012528_040 Hb_014109_020--Hb_000522_030 Hb_004375_020 Hb_004375_020 Hb_014109_020--Hb_004375_020 Hb_002630_030 Hb_002630_030 Hb_014109_020--Hb_002630_030 Hb_015824_020 Hb_015824_020 Hb_023386_030--Hb_015824_020 Hb_000497_310 Hb_000497_310 Hb_023386_030--Hb_000497_310 Hb_005666_030 Hb_005666_030 Hb_023386_030--Hb_005666_030 Hb_004968_090 Hb_004968_090 Hb_023386_030--Hb_004968_090 Hb_002041_010 Hb_002041_010 Hb_023386_030--Hb_002041_010 Hb_005551_030 Hb_005551_030 Hb_023386_030--Hb_005551_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0878914 0.101495 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.264102 2.2363

CAGE analysis