Hb_000405_010

Information

Type -
Description -
Location Contig405: 10774-36086
Sequence    

Annotation

kegg
ID cic:CICLE_v10018798mg
description hypothetical protein
nr
ID KDP41372.1
description hypothetical protein JCGZ_15779 [Jatropha curcas]
swissprot
ID C0LGQ5
description LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1
trembl
ID A0A067KYY7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15779 PE=4 SV=1
Gene Ontology
ID GO:0016301
description probable lrr receptor-like serine threonine-protein kinase at4g08850

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000405_010 0.0 - - hypothetical protein JCGZ_15779 [Jatropha curcas]
2 Hb_011931_090 0.0566147975 - - -
3 Hb_054127_020 0.0986785646 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
4 Hb_000432_020 0.1184012413 desease resistance Gene Name: Tropomyosin_1 PREDICTED: putative disease resistance protein RGA1 isoform X2 [Jatropha curcas]
5 Hb_000522_030 0.1185366574 - - hypothetical protein VITISV_006017 [Vitis vinifera]
6 Hb_150516_010 0.1204086234 - - PREDICTED: uncharacterized protein LOC104886268, partial [Beta vulgaris subsp. vulgaris]
7 Hb_027917_010 0.1242679661 - - PREDICTED: uncharacterized protein LOC103699089, partial [Phoenix dactylifera]
8 Hb_004375_020 0.1263662418 - - hypothetical protein VITISV_034560 [Vitis vinifera]
9 Hb_006356_030 0.1315888485 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
10 Hb_000923_110 0.1326466093 - - PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
11 Hb_005623_060 0.1369541551 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
12 Hb_049285_010 0.1403980648 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
13 Hb_000011_470 0.1467064358 - - PREDICTED: uncharacterized protein LOC103485923 [Cucumis melo]
14 Hb_011892_010 0.1479276463 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
15 Hb_013420_090 0.1482556011 - - BnaCnng13090D [Brassica napus]
16 Hb_004445_030 0.1503145524 - - conserved hypothetical protein [Ricinus communis]
17 Hb_014109_020 0.1563963665 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 53 [Jatropha curcas]
18 Hb_002576_010 0.1568136531 - - -
19 Hb_023386_030 0.1613125283 - - -
20 Hb_003169_040 0.1616444328 - - -

Gene co-expression network

sample Hb_000405_010 Hb_000405_010 Hb_011931_090 Hb_011931_090 Hb_000405_010--Hb_011931_090 Hb_054127_020 Hb_054127_020 Hb_000405_010--Hb_054127_020 Hb_000432_020 Hb_000432_020 Hb_000405_010--Hb_000432_020 Hb_000522_030 Hb_000522_030 Hb_000405_010--Hb_000522_030 Hb_150516_010 Hb_150516_010 Hb_000405_010--Hb_150516_010 Hb_027917_010 Hb_027917_010 Hb_000405_010--Hb_027917_010 Hb_011931_090--Hb_000522_030 Hb_011931_090--Hb_150516_010 Hb_005623_060 Hb_005623_060 Hb_011931_090--Hb_005623_060 Hb_014109_020 Hb_014109_020 Hb_011931_090--Hb_014109_020 Hb_023386_030 Hb_023386_030 Hb_011931_090--Hb_023386_030 Hb_006356_030 Hb_006356_030 Hb_054127_020--Hb_006356_030 Hb_000923_110 Hb_000923_110 Hb_054127_020--Hb_000923_110 Hb_004445_030 Hb_004445_030 Hb_054127_020--Hb_004445_030 Hb_002576_010 Hb_002576_010 Hb_054127_020--Hb_002576_010 Hb_047923_030 Hb_047923_030 Hb_054127_020--Hb_047923_030 Hb_007533_050 Hb_007533_050 Hb_000432_020--Hb_007533_050 Hb_003414_040 Hb_003414_040 Hb_000432_020--Hb_003414_040 Hb_003311_020 Hb_003311_020 Hb_000432_020--Hb_003311_020 Hb_093388_010 Hb_093388_010 Hb_000432_020--Hb_093388_010 Hb_151401_010 Hb_151401_010 Hb_000432_020--Hb_151401_010 Hb_001250_030 Hb_001250_030 Hb_000432_020--Hb_001250_030 Hb_000522_030--Hb_150516_010 Hb_000476_030 Hb_000476_030 Hb_000522_030--Hb_000476_030 Hb_000522_030--Hb_005623_060 Hb_000135_080 Hb_000135_080 Hb_000522_030--Hb_000135_080 Hb_150516_010--Hb_005623_060 Hb_000346_050 Hb_000346_050 Hb_150516_010--Hb_000346_050 Hb_019654_170 Hb_019654_170 Hb_150516_010--Hb_019654_170 Hb_009355_010 Hb_009355_010 Hb_027917_010--Hb_009355_010 Hb_139605_010 Hb_139605_010 Hb_027917_010--Hb_139605_010 Hb_032733_030 Hb_032733_030 Hb_027917_010--Hb_032733_030 Hb_027917_010--Hb_011931_090 Hb_027917_010--Hb_054127_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00709441 0.00305016 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0138361 0.135162

CAGE analysis