Hb_000923_110

Information

Type -
Description -
Location Contig923: 168241-176311
Sequence    

Annotation

kegg
ID cit:102624489
description uncharacterized LOC102624489
nr
ID XP_006494982.1
description PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
swissprot
ID -
description -
trembl
ID E7BQD7
description Mutant gag-pol polyprotein OS=Pisum sativum PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000923_110 0.0 - - PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
2 Hb_006356_030 0.0030705616 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
3 Hb_054127_020 0.0987913116 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
4 Hb_010367_010 0.1018661497 - - -
5 Hb_003868_010 0.1023375604 - - -
6 Hb_000466_180 0.1023539898 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
7 Hb_007167_100 0.1023732006 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
8 Hb_007251_010 0.1024037575 - - PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Jatropha curcas]
9 Hb_010132_070 0.1024200378 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
10 Hb_034066_010 0.1024238534 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
11 Hb_144850_070 0.1024300074 - - OSJNBa0032N05.11 [Oryza sativa Japonica Group]
12 Hb_012535_030 0.1024311304 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
13 Hb_114981_010 0.1024401977 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
14 Hb_004667_010 0.1024456194 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
15 Hb_007719_020 0.1024494057 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
16 Hb_010907_010 0.1024598477 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
17 Hb_147844_010 0.1024730191 - - putative 60S ribosomal protein L37 [Aegilops tauschii]
18 Hb_007014_020 0.1024752876 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
19 Hb_025864_010 0.1024895601 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
20 Hb_001446_050 0.102529882 - - putative polyprotein [Oryza sativa Japonica Group]

Gene co-expression network

sample Hb_000923_110 Hb_000923_110 Hb_006356_030 Hb_006356_030 Hb_000923_110--Hb_006356_030 Hb_054127_020 Hb_054127_020 Hb_000923_110--Hb_054127_020 Hb_010367_010 Hb_010367_010 Hb_000923_110--Hb_010367_010 Hb_003868_010 Hb_003868_010 Hb_000923_110--Hb_003868_010 Hb_000466_180 Hb_000466_180 Hb_000923_110--Hb_000466_180 Hb_007167_100 Hb_007167_100 Hb_000923_110--Hb_007167_100 Hb_006356_030--Hb_054127_020 Hb_006356_030--Hb_010367_010 Hb_006356_030--Hb_003868_010 Hb_000025_460 Hb_000025_460 Hb_006356_030--Hb_000025_460 Hb_120076_010 Hb_120076_010 Hb_006356_030--Hb_120076_010 Hb_000405_010 Hb_000405_010 Hb_054127_020--Hb_000405_010 Hb_004445_030 Hb_004445_030 Hb_054127_020--Hb_004445_030 Hb_002576_010 Hb_002576_010 Hb_054127_020--Hb_002576_010 Hb_047923_030 Hb_047923_030 Hb_054127_020--Hb_047923_030 Hb_010367_010--Hb_003868_010 Hb_010367_010--Hb_000025_460 Hb_010367_010--Hb_120076_010 Hb_000465_010 Hb_000465_010 Hb_010367_010--Hb_000465_010 Hb_010367_010--Hb_000466_180 Hb_010367_010--Hb_007167_100 Hb_003868_010--Hb_000025_460 Hb_003868_010--Hb_120076_010 Hb_003868_010--Hb_000465_010 Hb_003868_010--Hb_000466_180 Hb_003868_010--Hb_007167_100 Hb_000466_180--Hb_007167_100 Hb_007251_010 Hb_007251_010 Hb_000466_180--Hb_007251_010 Hb_010132_070 Hb_010132_070 Hb_000466_180--Hb_010132_070 Hb_034066_010 Hb_034066_010 Hb_000466_180--Hb_034066_010 Hb_144850_070 Hb_144850_070 Hb_000466_180--Hb_144850_070 Hb_012535_030 Hb_012535_030 Hb_000466_180--Hb_012535_030 Hb_007167_100--Hb_007251_010 Hb_007167_100--Hb_010132_070 Hb_007167_100--Hb_034066_010 Hb_007167_100--Hb_144850_070 Hb_007167_100--Hb_012535_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00939699 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0648601 0.385623

CAGE analysis