Hb_120076_010

Information

Type -
Description -
Location Contig120076: 16-408
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa018573mg
description hypothetical protein
nr
ID XP_010507347.1
description PREDICTED: uncharacterized protein LOC104783951 [Camelina sativa]
swissprot
ID -
description -
trembl
ID M5VGG8
description Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa018573mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_120076_010 0.0 - - PREDICTED: uncharacterized protein LOC104783951 [Camelina sativa]
2 Hb_000025_460 0.0017643964 - - PREDICTED: uncharacterized protein LOC104895905 [Beta vulgaris subsp. vulgaris]
3 Hb_003868_010 0.0060571341 - - -
4 Hb_000465_010 0.0082460435 - - PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial-like [Citrus sinensis]
5 Hb_010367_010 0.010342774 - - -
6 Hb_154188_010 0.0220304321 - - hypothetical protein CICLE_v10003434mg, partial [Citrus clementina]
7 Hb_012781_030 0.0246843921 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
8 Hb_073995_010 0.0256174009 - - receptor-like kinase [Medicago truncatula]
9 Hb_003088_040 0.0305988079 - - PREDICTED: uncharacterized protein LOC103417518 [Malus domestica]
10 Hb_000466_180 0.0331524552 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
11 Hb_007167_100 0.0332974885 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
12 Hb_007251_010 0.0335251331 - - PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Jatropha curcas]
13 Hb_010132_070 0.0336449445 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
14 Hb_034066_010 0.0336728798 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
15 Hb_144850_070 0.0337178222 - - OSJNBa0032N05.11 [Oryza sativa Japonica Group]
16 Hb_012535_030 0.033726009 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
17 Hb_114981_010 0.0337919356 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
18 Hb_004667_010 0.0338312139 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
19 Hb_007719_020 0.0338585806 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
20 Hb_010907_010 0.0339337908 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]

Gene co-expression network

sample Hb_120076_010 Hb_120076_010 Hb_000025_460 Hb_000025_460 Hb_120076_010--Hb_000025_460 Hb_003868_010 Hb_003868_010 Hb_120076_010--Hb_003868_010 Hb_000465_010 Hb_000465_010 Hb_120076_010--Hb_000465_010 Hb_010367_010 Hb_010367_010 Hb_120076_010--Hb_010367_010 Hb_154188_010 Hb_154188_010 Hb_120076_010--Hb_154188_010 Hb_012781_030 Hb_012781_030 Hb_120076_010--Hb_012781_030 Hb_000025_460--Hb_003868_010 Hb_000025_460--Hb_010367_010 Hb_000025_460--Hb_000465_010 Hb_000025_460--Hb_154188_010 Hb_000025_460--Hb_012781_030 Hb_003868_010--Hb_010367_010 Hb_003868_010--Hb_000465_010 Hb_000466_180 Hb_000466_180 Hb_003868_010--Hb_000466_180 Hb_007167_100 Hb_007167_100 Hb_003868_010--Hb_007167_100 Hb_000465_010--Hb_154188_010 Hb_000465_010--Hb_012781_030 Hb_073995_010 Hb_073995_010 Hb_000465_010--Hb_073995_010 Hb_010367_010--Hb_000465_010 Hb_010367_010--Hb_000466_180 Hb_010367_010--Hb_007167_100 Hb_154188_010--Hb_012781_030 Hb_154188_010--Hb_073995_010 Hb_003088_040 Hb_003088_040 Hb_154188_010--Hb_003088_040 Hb_013420_030 Hb_013420_030 Hb_154188_010--Hb_013420_030 Hb_094256_010 Hb_094256_010 Hb_154188_010--Hb_094256_010 Hb_012781_030--Hb_073995_010 Hb_012781_030--Hb_003088_040 Hb_012781_030--Hb_013420_030 Hb_012781_030--Hb_094256_010 Hb_002342_010 Hb_002342_010 Hb_012781_030--Hb_002342_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.126437 0.8598

CAGE analysis