Hb_073995_010

Information

Type -
Description -
Location Contig73995: 247-501
Sequence    

Annotation

kegg
ID cic:CICLE_v100110351m
description hypothetical protein
nr
ID KEH20271.1
description receptor-like kinase [Medicago truncatula]
swissprot
ID Q9LT96
description Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1
trembl
ID A0A072TSV5
description Receptor-like kinase OS=Medicago truncatula GN=MTR_8g070910 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable leucine-rich repeat receptor-like protein kinase at5g49770

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_073995_010 0.0 - - receptor-like kinase [Medicago truncatula]
2 Hb_012781_030 0.0009338071 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
3 Hb_154188_010 0.0035896907 - - hypothetical protein CICLE_v10003434mg, partial [Citrus clementina]
4 Hb_003088_040 0.0049867668 - - PREDICTED: uncharacterized protein LOC103417518 [Malus domestica]
5 Hb_013420_030 0.0096770921 - - conserved hypothetical protein [Ricinus communis]
6 Hb_094256_010 0.012105348 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
7 Hb_002342_010 0.0130532377 - - RALF-LIKE 27 family protein [Populus trichocarpa]
8 Hb_008562_020 0.0162380746 - - -
9 Hb_002874_220 0.0168527513 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g31250 [Jatropha curcas]
10 Hb_000465_010 0.0173761318 - - PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial-like [Citrus sinensis]
11 Hb_110426_010 0.0240391476 - - -
12 Hb_000723_150 0.0246851675 - - PREDICTED: high affinity nitrate transporter 2.4-like [Jatropha curcas]
13 Hb_120076_010 0.0256174009 - - PREDICTED: uncharacterized protein LOC104783951 [Camelina sativa]
14 Hb_002375_100 0.0271885642 - - PREDICTED: uncharacterized protein LOC104878944 [Vitis vinifera]
15 Hb_000025_460 0.0273802245 - - PREDICTED: uncharacterized protein LOC104895905 [Beta vulgaris subsp. vulgaris]
16 Hb_001172_110 0.0280719985 - - hypothetical protein JCGZ_11284 [Jatropha curcas]
17 Hb_001307_230 0.0299104678 - - PREDICTED: interferon-related developmental regulator 1-like [Jatropha curcas]
18 Hb_026317_020 0.0311490906 - - hypothetical protein VITISV_035911 [Vitis vinifera]
19 Hb_003868_010 0.0316683521 - - -
20 Hb_001782_090 0.0327215539 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62910-like [Vitis vinifera]

Gene co-expression network

sample Hb_073995_010 Hb_073995_010 Hb_012781_030 Hb_012781_030 Hb_073995_010--Hb_012781_030 Hb_154188_010 Hb_154188_010 Hb_073995_010--Hb_154188_010 Hb_003088_040 Hb_003088_040 Hb_073995_010--Hb_003088_040 Hb_013420_030 Hb_013420_030 Hb_073995_010--Hb_013420_030 Hb_094256_010 Hb_094256_010 Hb_073995_010--Hb_094256_010 Hb_002342_010 Hb_002342_010 Hb_073995_010--Hb_002342_010 Hb_012781_030--Hb_154188_010 Hb_012781_030--Hb_003088_040 Hb_012781_030--Hb_013420_030 Hb_012781_030--Hb_094256_010 Hb_012781_030--Hb_002342_010 Hb_154188_010--Hb_003088_040 Hb_154188_010--Hb_013420_030 Hb_000465_010 Hb_000465_010 Hb_154188_010--Hb_000465_010 Hb_154188_010--Hb_094256_010 Hb_003088_040--Hb_013420_030 Hb_003088_040--Hb_094256_010 Hb_003088_040--Hb_002342_010 Hb_013420_030--Hb_094256_010 Hb_013420_030--Hb_002342_010 Hb_008562_020 Hb_008562_020 Hb_013420_030--Hb_008562_020 Hb_002874_220 Hb_002874_220 Hb_013420_030--Hb_002874_220 Hb_094256_010--Hb_002342_010 Hb_094256_010--Hb_008562_020 Hb_094256_010--Hb_002874_220 Hb_110426_010 Hb_110426_010 Hb_094256_010--Hb_110426_010 Hb_002342_010--Hb_008562_020 Hb_002342_010--Hb_002874_220 Hb_002342_010--Hb_110426_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.968 16.134

CAGE analysis