Hb_094256_010

Information

Type -
Description -
Location Contig94256: 15-515
Sequence    

Annotation

kegg
ID rcu:RCOM_0191610
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.11.26)
nr
ID XP_002532358.1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
swissprot
ID P0DH87
description Putative inactive G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=PSEUDOSRKA PE=5 SV=1
trembl
ID B9T289
description Serine/threonine-protein kinase OS=Ricinus communis GN=RCOM_0191610 PE=3 SV=1
Gene Ontology
ID GO:0000166
description g-type lectin s-receptor-like serine threonine-protein kinase rlk1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_094256_010 0.0 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
2 Hb_002342_010 0.0009481197 - - RALF-LIKE 27 family protein [Populus trichocarpa]
3 Hb_013420_030 0.0024286888 - - conserved hypothetical protein [Ricinus communis]
4 Hb_008562_020 0.0041339837 - - -
5 Hb_002874_220 0.0047489044 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g31250 [Jatropha curcas]
6 Hb_003088_040 0.0071192275 - - PREDICTED: uncharacterized protein LOC103417518 [Malus domestica]
7 Hb_110426_010 0.0119392815 - - -
8 Hb_073995_010 0.012105348 - - receptor-like kinase [Medicago truncatula]
9 Hb_000723_150 0.0125857632 - - PREDICTED: high affinity nitrate transporter 2.4-like [Jatropha curcas]
10 Hb_012781_030 0.0130389367 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
11 Hb_002375_100 0.0150911159 - - PREDICTED: uncharacterized protein LOC104878944 [Vitis vinifera]
12 Hb_154188_010 0.0156940347 - - hypothetical protein CICLE_v10003434mg, partial [Citrus clementina]
13 Hb_001172_110 0.0159753042 - - hypothetical protein JCGZ_11284 [Jatropha curcas]
14 Hb_001307_230 0.0178154505 - - PREDICTED: interferon-related developmental regulator 1-like [Jatropha curcas]
15 Hb_026317_020 0.0190552863 - - hypothetical protein VITISV_035911 [Vitis vinifera]
16 Hb_001782_090 0.0206293869 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62910-like [Vitis vinifera]
17 Hb_000905_010 0.0210948851 - - PREDICTED: cytochrome P450 705A5-like [Jatropha curcas]
18 Hb_000777_010 0.0213605841 - - PREDICTED: uncharacterized protein LOC105766834 [Gossypium raimondii]
19 Hb_006599_040 0.0218475606 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
20 Hb_004145_030 0.0219104765 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]

Gene co-expression network

sample Hb_094256_010 Hb_094256_010 Hb_002342_010 Hb_002342_010 Hb_094256_010--Hb_002342_010 Hb_013420_030 Hb_013420_030 Hb_094256_010--Hb_013420_030 Hb_008562_020 Hb_008562_020 Hb_094256_010--Hb_008562_020 Hb_002874_220 Hb_002874_220 Hb_094256_010--Hb_002874_220 Hb_003088_040 Hb_003088_040 Hb_094256_010--Hb_003088_040 Hb_110426_010 Hb_110426_010 Hb_094256_010--Hb_110426_010 Hb_002342_010--Hb_008562_020 Hb_002342_010--Hb_013420_030 Hb_002342_010--Hb_002874_220 Hb_002342_010--Hb_003088_040 Hb_002342_010--Hb_110426_010 Hb_013420_030--Hb_003088_040 Hb_013420_030--Hb_008562_020 Hb_013420_030--Hb_002874_220 Hb_073995_010 Hb_073995_010 Hb_013420_030--Hb_073995_010 Hb_008562_020--Hb_002874_220 Hb_008562_020--Hb_110426_010 Hb_000723_150 Hb_000723_150 Hb_008562_020--Hb_000723_150 Hb_002874_220--Hb_110426_010 Hb_002874_220--Hb_000723_150 Hb_003088_040--Hb_073995_010 Hb_012781_030 Hb_012781_030 Hb_003088_040--Hb_012781_030 Hb_154188_010 Hb_154188_010 Hb_003088_040--Hb_154188_010 Hb_110426_010--Hb_000723_150 Hb_002375_100 Hb_002375_100 Hb_110426_010--Hb_002375_100 Hb_001172_110 Hb_001172_110 Hb_110426_010--Hb_001172_110 Hb_001307_230 Hb_001307_230 Hb_110426_010--Hb_001307_230 Hb_026317_020 Hb_026317_020 Hb_110426_010--Hb_026317_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0436813 0.393117

CAGE analysis