Hb_003868_010

Information

Type -
Description -
Location Contig3868: 9078-26441
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003868_010 0.0 - - -
2 Hb_010367_010 0.0042859515 - - -
3 Hb_000025_460 0.004292792 - - PREDICTED: uncharacterized protein LOC104895905 [Beta vulgaris subsp. vulgaris]
4 Hb_120076_010 0.0060571341 - - PREDICTED: uncharacterized protein LOC104783951 [Camelina sativa]
5 Hb_000465_010 0.0143023134 - - PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial-like [Citrus sinensis]
6 Hb_000466_180 0.0271013292 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
7 Hb_007167_100 0.0272464192 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
8 Hb_007251_010 0.0274741533 - - PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Jatropha curcas]
9 Hb_010132_070 0.027594012 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
10 Hb_034066_010 0.0276219584 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
11 Hb_144850_070 0.0276669186 - - OSJNBa0032N05.11 [Oryza sativa Japonica Group]
12 Hb_012535_030 0.0276751086 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
13 Hb_114981_010 0.0277410613 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
14 Hb_004667_010 0.0277803553 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
15 Hb_007719_020 0.0278077329 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
16 Hb_010907_010 0.027882973 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
17 Hb_147844_010 0.0279773328 - - putative 60S ribosomal protein L37 [Aegilops tauschii]
18 Hb_007014_020 0.0279935238 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
19 Hb_154188_010 0.0280828893 - - hypothetical protein CICLE_v10003434mg, partial [Citrus clementina]
20 Hb_025864_010 0.0280949863 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]

Gene co-expression network

sample Hb_003868_010 Hb_003868_010 Hb_010367_010 Hb_010367_010 Hb_003868_010--Hb_010367_010 Hb_000025_460 Hb_000025_460 Hb_003868_010--Hb_000025_460 Hb_120076_010 Hb_120076_010 Hb_003868_010--Hb_120076_010 Hb_000465_010 Hb_000465_010 Hb_003868_010--Hb_000465_010 Hb_000466_180 Hb_000466_180 Hb_003868_010--Hb_000466_180 Hb_007167_100 Hb_007167_100 Hb_003868_010--Hb_007167_100 Hb_010367_010--Hb_000025_460 Hb_010367_010--Hb_120076_010 Hb_010367_010--Hb_000465_010 Hb_010367_010--Hb_000466_180 Hb_010367_010--Hb_007167_100 Hb_000025_460--Hb_120076_010 Hb_000025_460--Hb_000465_010 Hb_154188_010 Hb_154188_010 Hb_000025_460--Hb_154188_010 Hb_012781_030 Hb_012781_030 Hb_000025_460--Hb_012781_030 Hb_120076_010--Hb_000465_010 Hb_120076_010--Hb_154188_010 Hb_120076_010--Hb_012781_030 Hb_000465_010--Hb_154188_010 Hb_000465_010--Hb_012781_030 Hb_073995_010 Hb_073995_010 Hb_000465_010--Hb_073995_010 Hb_000466_180--Hb_007167_100 Hb_007251_010 Hb_007251_010 Hb_000466_180--Hb_007251_010 Hb_010132_070 Hb_010132_070 Hb_000466_180--Hb_010132_070 Hb_034066_010 Hb_034066_010 Hb_000466_180--Hb_034066_010 Hb_144850_070 Hb_144850_070 Hb_000466_180--Hb_144850_070 Hb_012535_030 Hb_012535_030 Hb_000466_180--Hb_012535_030 Hb_007167_100--Hb_007251_010 Hb_007167_100--Hb_010132_070 Hb_007167_100--Hb_034066_010 Hb_007167_100--Hb_144850_070 Hb_007167_100--Hb_012535_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.344456 2.24529

CAGE analysis