Hb_011819_030

Information

Type -
Description -
Location Contig11819: 92109-95407
Sequence    

Annotation

kegg
ID rcu:RCOM_1237360
description cytochrome P450, putative (EC:1.14.13.77)
nr
ID XP_002522937.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID I7C6E8
description Beta-amyrin 28-oxidase OS=Panax ginseng PE=2 SV=1
trembl
ID B9SAB8
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1237360 PE=3 SV=1
Gene Ontology
ID GO:0005506
description beta-amyrin 28-oxidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011819_030 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_005993_070 0.0919957548 - - lipid binding protein, putative [Ricinus communis]
3 Hb_002743_030 0.0976522173 transcription factor TF Family: MYB PREDICTED: transcription factor RAX2 [Populus euphratica]
4 Hb_002603_020 0.0992858141 - - PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2-like isoform X1 [Jatropha curcas]
5 Hb_004109_300 0.1026318884 - - hypothetical protein POPTR_0003s21800g [Populus trichocarpa]
6 Hb_005731_080 0.1032903612 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
7 Hb_003074_070 0.1072467318 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
8 Hb_125876_010 0.1101375968 - - unnamed protein product [Vitis vinifera]
9 Hb_156949_010 0.1114645254 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
10 Hb_001621_140 0.1185822023 - - PREDICTED: glycerol-3-phosphate acyltransferase 5 [Jatropha curcas]
11 Hb_001080_310 0.1197589761 - - PREDICTED: ent-copalyl diphosphate synthase, chloroplastic [Jatropha curcas]
12 Hb_006446_060 0.1204003543 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Populus euphratica]
13 Hb_008159_030 0.1237329251 - - hypothetical protein B456_004G088300 [Gossypium raimondii]
14 Hb_000107_460 0.1238380707 - - PREDICTED: uncharacterized protein LOC104585930 [Nelumbo nucifera]
15 Hb_001504_290 0.1244244656 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
16 Hb_072368_010 0.1245064758 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
17 Hb_003724_030 0.1245980671 - - -
18 Hb_004693_030 0.124844924 - - PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica]
19 Hb_000526_130 0.1248524442 - - PREDICTED: cytochrome P450 705A5-like [Jatropha curcas]
20 Hb_005228_090 0.1252473158 - - PREDICTED: magnesium transporter MRS2-3-like [Citrus sinensis]

Gene co-expression network

sample Hb_011819_030 Hb_011819_030 Hb_005993_070 Hb_005993_070 Hb_011819_030--Hb_005993_070 Hb_002743_030 Hb_002743_030 Hb_011819_030--Hb_002743_030 Hb_002603_020 Hb_002603_020 Hb_011819_030--Hb_002603_020 Hb_004109_300 Hb_004109_300 Hb_011819_030--Hb_004109_300 Hb_005731_080 Hb_005731_080 Hb_011819_030--Hb_005731_080 Hb_003074_070 Hb_003074_070 Hb_011819_030--Hb_003074_070 Hb_005993_070--Hb_005731_080 Hb_006446_060 Hb_006446_060 Hb_005993_070--Hb_006446_060 Hb_001902_180 Hb_001902_180 Hb_005993_070--Hb_001902_180 Hb_005993_070--Hb_002743_030 Hb_000101_050 Hb_000101_050 Hb_005993_070--Hb_000101_050 Hb_125876_010 Hb_125876_010 Hb_005993_070--Hb_125876_010 Hb_002743_030--Hb_125876_010 Hb_002743_030--Hb_003074_070 Hb_002743_030--Hb_002603_020 Hb_047163_010 Hb_047163_010 Hb_002743_030--Hb_047163_010 Hb_002743_030--Hb_005731_080 Hb_002743_030--Hb_004109_300 Hb_156949_010 Hb_156949_010 Hb_002603_020--Hb_156949_010 Hb_002603_020--Hb_125876_010 Hb_000163_310 Hb_000163_310 Hb_002603_020--Hb_000163_310 Hb_007441_030 Hb_007441_030 Hb_002603_020--Hb_007441_030 Hb_000703_310 Hb_000703_310 Hb_002603_020--Hb_000703_310 Hb_002621_020 Hb_002621_020 Hb_002603_020--Hb_002621_020 Hb_004109_300--Hb_125876_010 Hb_004109_300--Hb_047163_010 Hb_000236_360 Hb_000236_360 Hb_004109_300--Hb_000236_360 Hb_004109_300--Hb_156949_010 Hb_004109_300--Hb_003074_070 Hb_012019_030 Hb_012019_030 Hb_005731_080--Hb_012019_030 Hb_006478_190 Hb_006478_190 Hb_005731_080--Hb_006478_190 Hb_004195_040 Hb_004195_040 Hb_005731_080--Hb_004195_040 Hb_000365_300 Hb_000365_300 Hb_005731_080--Hb_000365_300 Hb_122574_020 Hb_122574_020 Hb_003074_070--Hb_122574_020 Hb_003074_070--Hb_004195_040 Hb_003074_070--Hb_012019_030 Hb_000951_030 Hb_000951_030 Hb_003074_070--Hb_000951_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.014 0 0.19971 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0546189 0 0.081076 9.6427 0.0903133

CAGE analysis