Hb_000951_030

Information

Type -
Description -
Location Contig951: 87363-89450
Sequence    

Annotation

kegg
ID rcu:RCOM_0818450
description kinase, putative (EC:2.7.11.22)
nr
ID XP_002518333.1
description kinase, putative [Ricinus communis]
swissprot
ID Q9LXA5
description L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1
trembl
ID B9RX64
description Kinase, putative OS=Ricinus communis GN=RCOM_0818450 PE=3 SV=1
Gene Ontology
ID GO:0004672
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000951_030 0.0 - - kinase, putative [Ricinus communis]
2 Hb_002556_020 0.0430512987 - - hypothetical protein JCGZ_12588 [Jatropha curcas]
3 Hb_000302_060 0.0619483638 - - unnamed protein product [Vitis vinifera]
4 Hb_122574_020 0.0681469045 - - hypothetical protein JCGZ_24076 [Jatropha curcas]
5 Hb_002204_030 0.069748371 - - PREDICTED: uncharacterized protein LOC105764710 isoform X3 [Gossypium raimondii]
6 Hb_002475_020 0.0760603905 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1 [Populus euphratica]
7 Hb_005218_070 0.0916713042 transcription factor TF Family: MYB PREDICTED: transcription factor RAX3 isoform X2 [Populus euphratica]
8 Hb_003074_070 0.0921648519 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
9 Hb_002999_090 0.0925750313 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002081_040 0.092874325 - - PREDICTED: nucleobase-ascorbate transporter 4 [Jatropha curcas]
11 Hb_000141_230 0.0939940796 - - PREDICTED: 14 kDa proline-rich protein DC2.15-like [Camelina sativa]
12 Hb_009515_010 0.0951761856 transcription factor TF Family: HB hypothetical protein JCGZ_15302 [Jatropha curcas]
13 Hb_161393_010 0.1063276096 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_003462_150 0.107760803 - - PREDICTED: chitinase 1-like [Eucalyptus grandis]
15 Hb_004544_080 0.1120013067 - - lectin protein kinase [Populus trichocarpa]
16 Hb_005228_170 0.1169812454 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
17 Hb_001621_140 0.1173980902 - - PREDICTED: glycerol-3-phosphate acyltransferase 5 [Jatropha curcas]
18 Hb_011856_010 0.1185377113 - - cytochrome P450, putative [Ricinus communis]
19 Hb_139460_010 0.1195239962 - - PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
20 Hb_000334_250 0.1214343158 - - Polygalacturonase precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000951_030 Hb_000951_030 Hb_002556_020 Hb_002556_020 Hb_000951_030--Hb_002556_020 Hb_000302_060 Hb_000302_060 Hb_000951_030--Hb_000302_060 Hb_122574_020 Hb_122574_020 Hb_000951_030--Hb_122574_020 Hb_002204_030 Hb_002204_030 Hb_000951_030--Hb_002204_030 Hb_002475_020 Hb_002475_020 Hb_000951_030--Hb_002475_020 Hb_005218_070 Hb_005218_070 Hb_000951_030--Hb_005218_070 Hb_002999_090 Hb_002999_090 Hb_002556_020--Hb_002999_090 Hb_002556_020--Hb_002475_020 Hb_002556_020--Hb_000302_060 Hb_000141_230 Hb_000141_230 Hb_002556_020--Hb_000141_230 Hb_003462_150 Hb_003462_150 Hb_002556_020--Hb_003462_150 Hb_000302_060--Hb_002204_030 Hb_009515_010 Hb_009515_010 Hb_000302_060--Hb_009515_010 Hb_000302_060--Hb_000141_230 Hb_000302_060--Hb_002475_020 Hb_003074_070 Hb_003074_070 Hb_122574_020--Hb_003074_070 Hb_139460_010 Hb_139460_010 Hb_122574_020--Hb_139460_010 Hb_004195_040 Hb_004195_040 Hb_122574_020--Hb_004195_040 Hb_011856_010 Hb_011856_010 Hb_122574_020--Hb_011856_010 Hb_122574_020--Hb_002556_020 Hb_002204_030--Hb_009515_010 Hb_000334_250 Hb_000334_250 Hb_002204_030--Hb_000334_250 Hb_002204_030--Hb_005218_070 Hb_002204_030--Hb_002556_020 Hb_002475_020--Hb_000141_230 Hb_002475_020--Hb_002999_090 Hb_002475_020--Hb_003462_150 Hb_004544_080 Hb_004544_080 Hb_002475_020--Hb_004544_080 Hb_005228_170 Hb_005228_170 Hb_005218_070--Hb_005228_170 Hb_005218_070--Hb_000302_060 Hb_005218_070--Hb_002475_020 Hb_005218_070--Hb_009515_010 Hb_002671_110 Hb_002671_110 Hb_005218_070--Hb_002671_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.134621 0 0.0487791 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.450158 0

CAGE analysis