Hb_011344_180

Information

Type -
Description -
Location Contig11344: 152951-153788
Sequence    

Annotation

kegg
ID egr:104443724
description UDP-glucuronate 4-epimerase 3-like
nr
ID KDP25603.1
description hypothetical protein JCGZ_20759 [Jatropha curcas]
swissprot
ID O22141
description UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1 SV=1
trembl
ID A0A067JRY4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20759 PE=4 SV=1
Gene Ontology
ID GO:0016020
description udp-glucuronate 4-epimerase 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011344_180 0.0 - - hypothetical protein JCGZ_20759 [Jatropha curcas]
2 Hb_000367_170 0.2399008417 - - PREDICTED: LYR motif-containing protein 4 [Jatropha curcas]
3 Hb_080147_090 0.24830056 - - hypothetical protein JCGZ_07271 [Jatropha curcas]
4 Hb_021888_130 0.2526980444 - - -
5 Hb_012395_200 0.2608086877 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002400_090 0.2642669596 - - -
7 Hb_002890_260 0.2650261199 - - -
8 Hb_004680_020 0.2658676109 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105789475 [Gossypium raimondii]
9 Hb_015978_070 0.266992191 - - -
10 Hb_000122_030 0.2687831364 - - PREDICTED: uncharacterized protein LOC104606081, partial [Nelumbo nucifera]
11 Hb_005009_020 0.2700540398 - - -
12 Hb_001792_080 0.2729906429 - - unknown [Populus trichocarpa]
13 Hb_000847_140 0.2740281174 - - -
14 Hb_161072_020 0.2791480817 - - -
15 Hb_029580_010 0.27916387 - - PREDICTED: uncharacterized protein LOC105633393 [Jatropha curcas]
16 Hb_005063_070 0.2793775958 - - PREDICTED: PRA1 family protein E [Jatropha curcas]
17 Hb_000563_530 0.2815276622 - - PREDICTED: uncharacterized protein LOC105643453 [Jatropha curcas]
18 Hb_012305_120 0.2815438055 - - PREDICTED: 60S ribosomal protein L29-1-like [Glycine max]
19 Hb_000039_170 0.2825276371 - - protein MOTHER of FT and TF 1-like [Jatropha curcas]
20 Hb_000096_060 0.2832102654 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_011344_180 Hb_011344_180 Hb_000367_170 Hb_000367_170 Hb_011344_180--Hb_000367_170 Hb_080147_090 Hb_080147_090 Hb_011344_180--Hb_080147_090 Hb_021888_130 Hb_021888_130 Hb_011344_180--Hb_021888_130 Hb_012395_200 Hb_012395_200 Hb_011344_180--Hb_012395_200 Hb_002400_090 Hb_002400_090 Hb_011344_180--Hb_002400_090 Hb_002890_260 Hb_002890_260 Hb_011344_180--Hb_002890_260 Hb_015978_070 Hb_015978_070 Hb_000367_170--Hb_015978_070 Hb_001575_030 Hb_001575_030 Hb_000367_170--Hb_001575_030 Hb_001610_130 Hb_001610_130 Hb_000367_170--Hb_001610_130 Hb_011310_060 Hb_011310_060 Hb_000367_170--Hb_011310_060 Hb_001053_160 Hb_001053_160 Hb_000367_170--Hb_001053_160 Hb_000009_040 Hb_000009_040 Hb_000367_170--Hb_000009_040 Hb_005690_020 Hb_005690_020 Hb_080147_090--Hb_005690_020 Hb_000243_010 Hb_000243_010 Hb_080147_090--Hb_000243_010 Hb_000003_350 Hb_000003_350 Hb_080147_090--Hb_000003_350 Hb_048197_010 Hb_048197_010 Hb_080147_090--Hb_048197_010 Hb_005009_020 Hb_005009_020 Hb_080147_090--Hb_005009_020 Hb_075653_020 Hb_075653_020 Hb_080147_090--Hb_075653_020 Hb_049415_020 Hb_049415_020 Hb_021888_130--Hb_049415_020 Hb_000330_170 Hb_000330_170 Hb_021888_130--Hb_000330_170 Hb_021888_130--Hb_002400_090 Hb_008725_200 Hb_008725_200 Hb_021888_130--Hb_008725_200 Hb_033448_010 Hb_033448_010 Hb_021888_130--Hb_033448_010 Hb_021888_130--Hb_000243_010 Hb_000684_160 Hb_000684_160 Hb_012395_200--Hb_000684_160 Hb_001008_010 Hb_001008_010 Hb_012395_200--Hb_001008_010 Hb_000078_010 Hb_000078_010 Hb_012395_200--Hb_000078_010 Hb_001723_080 Hb_001723_080 Hb_012395_200--Hb_001723_080 Hb_007810_030 Hb_007810_030 Hb_012395_200--Hb_007810_030 Hb_074590_010 Hb_074590_010 Hb_012395_200--Hb_074590_010 Hb_000329_600 Hb_000329_600 Hb_002400_090--Hb_000329_600 Hb_000603_220 Hb_000603_220 Hb_002400_090--Hb_000603_220 Hb_002374_460 Hb_002374_460 Hb_002400_090--Hb_002374_460 Hb_002400_090--Hb_000330_170 Hb_005935_010 Hb_005935_010 Hb_002400_090--Hb_005935_010 Hb_000369_090 Hb_000369_090 Hb_002890_260--Hb_000369_090 Hb_002890_260--Hb_000603_220 Hb_004025_030 Hb_004025_030 Hb_002890_260--Hb_004025_030 Hb_000184_120 Hb_000184_120 Hb_002890_260--Hb_000184_120 Hb_043061_010 Hb_043061_010 Hb_002890_260--Hb_043061_010 Hb_002890_260--Hb_033448_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.0608899 0.36521
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.149613 0.411697 0.105595 0.0477464 0

CAGE analysis