Hb_011249_010

Information

Type -
Description -
Location Contig11249: 4505-20249
Sequence    

Annotation

kegg
ID rcu:RCOM_0271950
description acetyltransferase, putative
nr
ID XP_012081183.1
description PREDICTED: N-alpha-acetyltransferase 35, NatC auxiliary subunit isoform X1 [Jatropha curcas]
swissprot
ID Q5ZHV2
description N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Gallus gallus GN=NAA35 PE=2 SV=1
trembl
ID A0A067K2C3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17024 PE=4 SV=1
Gene Ontology
ID GO:0016740
description n-alpha-acetyltransferase auxiliary subunit-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03841: 5302-6419 , PASA_asmbl_03842: 6771-14136 , PASA_asmbl_03843: 14349-14600 , PASA_asmbl_03847: 17716-20204
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011249_010 0.0 - - PREDICTED: N-alpha-acetyltransferase 35, NatC auxiliary subunit isoform X1 [Jatropha curcas]
2 Hb_011671_430 0.0917896327 - - PREDICTED: uncharacterized protein LOC105648668 [Jatropha curcas]
3 Hb_001454_090 0.0918154136 - - PREDICTED: alanyl-tRNA editing protein Aarsd1 isoform X1 [Jatropha curcas]
4 Hb_000096_070 0.0932048747 - - PREDICTED: ruvB-like 2 [Jatropha curcas]
5 Hb_000227_090 0.0933180871 - - PREDICTED: NEDD8-activating enzyme E1 catalytic subunit [Jatropha curcas]
6 Hb_014497_050 0.0956903736 transcription factor TF Family: bZIP hypothetical protein JCGZ_08021 [Jatropha curcas]
7 Hb_007254_070 0.0963443676 - - PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform X1 [Jatropha curcas]
8 Hb_000907_110 0.0984434438 - - dihydroxyacetone kinase family protein [Populus trichocarpa]
9 Hb_003058_190 0.1000003251 - - PREDICTED: uncharacterized protein LOC105628951 isoform X1 [Jatropha curcas]
10 Hb_003158_010 0.1003011176 - - hypothetical protein JCGZ_17361 [Jatropha curcas]
11 Hb_000034_100 0.1014408293 - - dnajc14 protein, putative [Ricinus communis]
12 Hb_000038_170 0.1022407246 - - PREDICTED: SCY1-like protein 2 [Jatropha curcas]
13 Hb_000221_250 0.1046434581 - - hypothetical protein JCGZ_15814 [Jatropha curcas]
14 Hb_002217_510 0.104906162 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000032_270 0.1049263264 - - PREDICTED: F-box/LRR-repeat protein 13 [Jatropha curcas]
16 Hb_000853_420 0.1054862914 - - PREDICTED: phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial [Jatropha curcas]
17 Hb_003163_020 0.1066448102 - - PREDICTED: polyadenylate-binding protein-interacting protein 12-like isoform X1 [Jatropha curcas]
18 Hb_008511_120 0.1075484028 - - NADH-ubiquinone oxidoreductase 1, chain, putative [Ricinus communis]
19 Hb_002890_290 0.1075720164 - - PREDICTED: outer envelope protein 64, mitochondrial [Jatropha curcas]
20 Hb_004355_020 0.1086864423 - - PREDICTED: lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_011249_010 Hb_011249_010 Hb_011671_430 Hb_011671_430 Hb_011249_010--Hb_011671_430 Hb_001454_090 Hb_001454_090 Hb_011249_010--Hb_001454_090 Hb_000096_070 Hb_000096_070 Hb_011249_010--Hb_000096_070 Hb_000227_090 Hb_000227_090 Hb_011249_010--Hb_000227_090 Hb_014497_050 Hb_014497_050 Hb_011249_010--Hb_014497_050 Hb_007254_070 Hb_007254_070 Hb_011249_010--Hb_007254_070 Hb_000038_170 Hb_000038_170 Hb_011671_430--Hb_000038_170 Hb_004577_020 Hb_004577_020 Hb_011671_430--Hb_004577_020 Hb_011671_430--Hb_014497_050 Hb_003058_190 Hb_003058_190 Hb_011671_430--Hb_003058_190 Hb_004355_020 Hb_004355_020 Hb_011671_430--Hb_004355_020 Hb_003158_010 Hb_003158_010 Hb_011671_430--Hb_003158_010 Hb_000034_100 Hb_000034_100 Hb_001454_090--Hb_000034_100 Hb_000853_420 Hb_000853_420 Hb_001454_090--Hb_000853_420 Hb_001454_090--Hb_000096_070 Hb_001386_120 Hb_001386_120 Hb_001454_090--Hb_001386_120 Hb_000296_070 Hb_000296_070 Hb_001454_090--Hb_000296_070 Hb_000016_250 Hb_000016_250 Hb_000096_070--Hb_000016_250 Hb_000096_070--Hb_000034_100 Hb_002518_280 Hb_002518_280 Hb_000096_070--Hb_002518_280 Hb_000096_070--Hb_003058_190 Hb_000563_320 Hb_000563_320 Hb_000096_070--Hb_000563_320 Hb_002248_080 Hb_002248_080 Hb_000096_070--Hb_002248_080 Hb_000130_410 Hb_000130_410 Hb_000227_090--Hb_000130_410 Hb_000120_170 Hb_000120_170 Hb_000227_090--Hb_000120_170 Hb_001541_230 Hb_001541_230 Hb_000227_090--Hb_001541_230 Hb_000000_270 Hb_000000_270 Hb_000227_090--Hb_000000_270 Hb_002217_510 Hb_002217_510 Hb_000227_090--Hb_002217_510 Hb_154114_010 Hb_154114_010 Hb_000227_090--Hb_154114_010 Hb_021409_040 Hb_021409_040 Hb_014497_050--Hb_021409_040 Hb_000366_120 Hb_000366_120 Hb_014497_050--Hb_000366_120 Hb_000915_020 Hb_000915_020 Hb_014497_050--Hb_000915_020 Hb_028285_010 Hb_028285_010 Hb_014497_050--Hb_028285_010 Hb_000030_190 Hb_000030_190 Hb_014497_050--Hb_000030_190 Hb_167498_010 Hb_167498_010 Hb_007254_070--Hb_167498_010 Hb_007254_070--Hb_004355_020 Hb_120327_010 Hb_120327_010 Hb_007254_070--Hb_120327_010 Hb_002903_060 Hb_002903_060 Hb_007254_070--Hb_002903_060 Hb_000395_130 Hb_000395_130 Hb_007254_070--Hb_000395_130 Hb_007254_070--Hb_003158_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.04012 10.4826 8.10563 5.25333 13.5297 8.21126
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.3221 8.39807 8.85985 9.55919 5.0561

CAGE analysis