Hb_004577_020

Information

Type -
Description -
Location Contig4577: 40381-54438
Sequence    

Annotation

kegg
ID mus:103996069
description MOB kinase activator-like 1
nr
ID XP_012075082.1
description PREDICTED: MOB kinase activator-like 1 [Jatropha curcas]
swissprot
ID Q8GYX0
description MOB kinase activator-like 1B OS=Arabidopsis thaliana GN=MOB1B PE=2 SV=1
trembl
ID A0A067KT30
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10818 PE=4 SV=1
Gene Ontology
ID GO:0016301
description mob kinase activator-like 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43494: 40395-54196
cDNA
(Sanger)
(ID:Location)		 007_J14.ab1: 40450-54119 , 025_P04.ab1: 40503-54192

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004577_020 0.0 - - PREDICTED: MOB kinase activator-like 1 [Jatropha curcas]
2 Hb_011671_430 0.0600785891 - - PREDICTED: uncharacterized protein LOC105648668 [Jatropha curcas]
3 Hb_010417_080 0.0613199632 - - PREDICTED: uncharacterized protein LOC105645742 isoform X1 [Jatropha curcas]
4 Hb_000853_350 0.0647330465 - - PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Jatropha curcas]
5 Hb_001936_020 0.0651890877 - - PREDICTED: phosphatidylinositol 3-kinase, root isoform isoform X1 [Jatropha curcas]
6 Hb_000853_170 0.0688758145 - - PREDICTED: programmed cell death protein 2 isoform X3 [Populus euphratica]
7 Hb_003952_070 0.0696704262 - - ubiquitin-protein ligase, putative [Ricinus communis]
8 Hb_001489_150 0.076963658 - - PREDICTED: uncharacterized protein LOC105123623 isoform X2 [Populus euphratica]
9 Hb_004355_020 0.078189194 - - PREDICTED: lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [Jatropha curcas]
10 Hb_001486_340 0.0784959793 - - PREDICTED: double-stranded RNA-binding protein 1-like [Jatropha curcas]
11 Hb_000038_170 0.0790355312 - - PREDICTED: SCY1-like protein 2 [Jatropha curcas]
12 Hb_011218_040 0.080301331 - - methylenetetrahydrofolate dehydrogenase, putative [Ricinus communis]
13 Hb_002255_030 0.0819727373 - - PREDICTED: INO80 complex subunit D-like [Jatropha curcas]
14 Hb_005064_060 0.0822025818 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
15 Hb_000630_050 0.0836164751 - - conserved hypothetical protein [Ricinus communis]
16 Hb_006827_020 0.0847441183 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000629_010 0.0852636003 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 32 isoform X1 [Jatropha curcas]
18 Hb_001252_010 0.0855264764 - - hypothetical protein JCGZ_01389 [Jatropha curcas]
19 Hb_014497_050 0.0861292393 transcription factor TF Family: bZIP hypothetical protein JCGZ_08021 [Jatropha curcas]
20 Hb_005276_210 0.0862707105 - - PREDICTED: DNA repair helicase UVH6 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_004577_020 Hb_004577_020 Hb_011671_430 Hb_011671_430 Hb_004577_020--Hb_011671_430 Hb_010417_080 Hb_010417_080 Hb_004577_020--Hb_010417_080 Hb_000853_350 Hb_000853_350 Hb_004577_020--Hb_000853_350 Hb_001936_020 Hb_001936_020 Hb_004577_020--Hb_001936_020 Hb_000853_170 Hb_000853_170 Hb_004577_020--Hb_000853_170 Hb_003952_070 Hb_003952_070 Hb_004577_020--Hb_003952_070 Hb_000038_170 Hb_000038_170 Hb_011671_430--Hb_000038_170 Hb_014497_050 Hb_014497_050 Hb_011671_430--Hb_014497_050 Hb_003058_190 Hb_003058_190 Hb_011671_430--Hb_003058_190 Hb_004355_020 Hb_004355_020 Hb_011671_430--Hb_004355_020 Hb_003158_010 Hb_003158_010 Hb_011671_430--Hb_003158_010 Hb_001221_100 Hb_001221_100 Hb_010417_080--Hb_001221_100 Hb_005064_060 Hb_005064_060 Hb_010417_080--Hb_005064_060 Hb_004046_050 Hb_004046_050 Hb_010417_080--Hb_004046_050 Hb_011218_040 Hb_011218_040 Hb_010417_080--Hb_011218_040 Hb_039946_020 Hb_039946_020 Hb_010417_080--Hb_039946_020 Hb_001579_320 Hb_001579_320 Hb_000853_350--Hb_001579_320 Hb_000193_190 Hb_000193_190 Hb_000853_350--Hb_000193_190 Hb_000853_350--Hb_003952_070 Hb_040262_010 Hb_040262_010 Hb_000853_350--Hb_040262_010 Hb_000205_100 Hb_000205_100 Hb_000853_350--Hb_000205_100 Hb_003994_240 Hb_003994_240 Hb_001936_020--Hb_003994_240 Hb_000483_360 Hb_000483_360 Hb_001936_020--Hb_000483_360 Hb_004108_140 Hb_004108_140 Hb_001936_020--Hb_004108_140 Hb_001936_020--Hb_011671_430 Hb_000059_210 Hb_000059_210 Hb_001936_020--Hb_000059_210 Hb_000853_420 Hb_000853_420 Hb_000853_170--Hb_000853_420 Hb_000109_090 Hb_000109_090 Hb_000853_170--Hb_000109_090 Hb_005276_210 Hb_005276_210 Hb_000853_170--Hb_005276_210 Hb_001006_140 Hb_001006_140 Hb_000853_170--Hb_001006_140 Hb_015746_010 Hb_015746_010 Hb_000853_170--Hb_015746_010 Hb_004881_020 Hb_004881_020 Hb_003952_070--Hb_004881_020 Hb_006252_040 Hb_006252_040 Hb_003952_070--Hb_006252_040 Hb_007594_130 Hb_007594_130 Hb_003952_070--Hb_007594_130 Hb_000538_100 Hb_000538_100 Hb_003952_070--Hb_000538_100 Hb_003952_070--Hb_005276_210 Hb_001489_150 Hb_001489_150 Hb_003952_070--Hb_001489_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
188.334 156.342 79.3795 105.892 182.762 200.818
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
217.954 164.312 113.788 158.262 60.5809

CAGE analysis