Hb_009780_070

Information

Type -
Description -
Location Contig9780: 63844-73708
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_012067244.1
description PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LBB3
description Glucose-1-phosphate adenylyltransferase OS=Jatropha curcas GN=JCGZ_26788 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009780_070 0.0 - - PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 1 [Jatropha curcas]
2 Hb_003371_170 0.1775710961 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001998_140 0.1933854823 - - -
4 Hb_076875_020 0.1953099006 - - PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Jatropha curcas]
5 Hb_026228_010 0.1961597206 - - conserved hypothetical protein [Ricinus communis]
6 Hb_074979_010 0.1983626773 - - hypothetical protein AALP_AA2G213100 [Arabis alpina]
7 Hb_005679_070 0.2023754484 - - hypothetical protein M569_07741, partial [Genlisea aurea]
8 Hb_000329_560 0.2031544681 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002784_070 0.2098731817 - - BnaUnng01470D [Brassica napus]
10 Hb_006663_090 0.2149879802 - - hypothetical protein B456_010G1255001, partial [Gossypium raimondii]
11 Hb_000342_160 0.2155919468 - - PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Jatropha curcas]
12 Hb_003633_040 0.2180033065 - - hypothetical protein B456_008G146200 [Gossypium raimondii]
13 Hb_000074_060 0.2188093028 - - PREDICTED: membrane-associated progesterone-binding protein 4-like [Populus euphratica]
14 Hb_089202_010 0.2196705565 - - PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit-like [Nicotiana sylvestris]
15 Hb_000015_070 0.2197065996 - - hypothetical protein POPTR_0001s22690g [Populus trichocarpa]
16 Hb_005085_030 0.227813068 - - PREDICTED: N-acetyltransferase 9-like protein isoform X1 [Jatropha curcas]
17 Hb_081517_010 0.2294032499 - - PREDICTED: putative potassium transporter 12 isoform X2 [Jatropha curcas]
18 Hb_002815_050 0.2303632284 - - PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial [Populus euphratica]
19 Hb_007188_030 0.2310067301 - - PREDICTED: DNA topoisomerase 3-alpha-like [Malus domestica]
20 Hb_068014_010 0.2324727253 - - hypothetical protein POPTR_0312s00200g, partial [Populus trichocarpa]

Gene co-expression network

sample Hb_009780_070 Hb_009780_070 Hb_003371_170 Hb_003371_170 Hb_009780_070--Hb_003371_170 Hb_001998_140 Hb_001998_140 Hb_009780_070--Hb_001998_140 Hb_076875_020 Hb_076875_020 Hb_009780_070--Hb_076875_020 Hb_026228_010 Hb_026228_010 Hb_009780_070--Hb_026228_010 Hb_074979_010 Hb_074979_010 Hb_009780_070--Hb_074979_010 Hb_005679_070 Hb_005679_070 Hb_009780_070--Hb_005679_070 Hb_000015_070 Hb_000015_070 Hb_003371_170--Hb_000015_070 Hb_006663_090 Hb_006663_090 Hb_003371_170--Hb_006663_090 Hb_106415_010 Hb_106415_010 Hb_003371_170--Hb_106415_010 Hb_108227_010 Hb_108227_010 Hb_003371_170--Hb_108227_010 Hb_003371_170--Hb_076875_020 Hb_068014_010 Hb_068014_010 Hb_003371_170--Hb_068014_010 Hb_006198_090 Hb_006198_090 Hb_001998_140--Hb_006198_090 Hb_001998_140--Hb_005679_070 Hb_007188_030 Hb_007188_030 Hb_001998_140--Hb_007188_030 Hb_002482_060 Hb_002482_060 Hb_001998_140--Hb_002482_060 Hb_001998_140--Hb_026228_010 Hb_010565_040 Hb_010565_040 Hb_001998_140--Hb_010565_040 Hb_010565_010 Hb_010565_010 Hb_076875_020--Hb_010565_010 Hb_152554_010 Hb_152554_010 Hb_076875_020--Hb_152554_010 Hb_000812_040 Hb_000812_040 Hb_076875_020--Hb_000812_040 Hb_001135_140 Hb_001135_140 Hb_076875_020--Hb_001135_140 Hb_038237_010 Hb_038237_010 Hb_076875_020--Hb_038237_010 Hb_007188_020 Hb_007188_020 Hb_076875_020--Hb_007188_020 Hb_000329_560 Hb_000329_560 Hb_026228_010--Hb_000329_560 Hb_026228_010--Hb_005679_070 Hb_003688_110 Hb_003688_110 Hb_026228_010--Hb_003688_110 Hb_002200_050 Hb_002200_050 Hb_026228_010--Hb_002200_050 Hb_000810_020 Hb_000810_020 Hb_026228_010--Hb_000810_020 Hb_000162_100 Hb_000162_100 Hb_074979_010--Hb_000162_100 Hb_074979_010--Hb_076875_020 Hb_000108_140 Hb_000108_140 Hb_074979_010--Hb_000108_140 Hb_003633_040 Hb_003633_040 Hb_074979_010--Hb_003633_040 Hb_067776_010 Hb_067776_010 Hb_074979_010--Hb_067776_010 Hb_001386_140 Hb_001386_140 Hb_074979_010--Hb_001386_140 Hb_002815_050 Hb_002815_050 Hb_005679_070--Hb_002815_050 Hb_005679_070--Hb_000329_560 Hb_005085_030 Hb_005085_030 Hb_005679_070--Hb_005085_030 Hb_005679_070--Hb_068014_010 Hb_005679_070--Hb_006663_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.09704 0.446961 0 3.05004 0.386764 4.27272
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.239218 1.50362 0.87478 0.740521 0.638664

CAGE analysis