Hb_007441_350

Information

Type -
Description -
Location Contig7441: 218064-220819
Sequence    

Annotation

kegg
ID rcu:RCOM_0658850
description ATPUP11, putative
nr
ID XP_012083761.1
description PREDICTED: probable purine permease 11 [Jatropha curcas]
swissprot
ID Q9LPF6
description Probable purine permease 11 OS=Arabidopsis thaliana GN=PUP11 PE=1 SV=1
trembl
ID A0A067K9E7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14681 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable purine permease 11 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56655: 218155-220058
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007441_350 0.0 - - PREDICTED: probable purine permease 11 [Jatropha curcas]
2 Hb_026048_100 0.1043918193 - - PREDICTED: putative cell division cycle ATPase [Jatropha curcas]
3 Hb_002007_270 0.1077544235 - - PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g05340-like [Jatropha curcas]
4 Hb_007760_030 0.108334914 transcription factor TF Family: M-type hypothetical protein JCGZ_15623 [Jatropha curcas]
5 Hb_063134_010 0.1090230627 transcription factor TF Family: SET histone-lysine n-methyltransferase, suvh, putative [Ricinus communis]
6 Hb_011224_080 0.1101408598 - - PREDICTED: coiled-coil domain-containing protein 22 homolog isoform X1 [Jatropha curcas]
7 Hb_000836_070 0.1138945143 - - protein binding protein, putative [Ricinus communis]
8 Hb_002368_050 0.1140145833 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000188_100 0.1142197894 - - PREDICTED: protein YIPF5 homolog [Jatropha curcas]
10 Hb_000179_210 0.1143904943 - - PREDICTED: uncharacterized protein LOC105637927 [Jatropha curcas]
11 Hb_079820_010 0.1152916347 - - PREDICTED: diphthamide biosynthesis protein 1 [Jatropha curcas]
12 Hb_001823_100 0.1164896433 - - PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis vinifera]
13 Hb_000186_240 0.1168757067 - - PREDICTED: 39S ribosomal protein L4, mitochondrial [Jatropha curcas]
14 Hb_000386_040 0.1179951184 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
15 Hb_000172_370 0.1184989114 - - -
16 Hb_010638_020 0.1202238734 - - PREDICTED: uncharacterized protein LOC105638189 isoform X3 [Jatropha curcas]
17 Hb_006693_030 0.1206564806 - - PREDICTED: ribonuclease H2 subunit A [Jatropha curcas]
18 Hb_003297_030 0.1212035723 - - PREDICTED: uncharacterized protein LOC105640530 [Jatropha curcas]
19 Hb_001842_070 0.1212152302 - - PREDICTED: uncharacterized protein LOC105637106 [Jatropha curcas]
20 Hb_004852_030 0.1218622172 - - PREDICTED: uncharacterized protein LOC105639923 [Jatropha curcas]

Gene co-expression network

sample Hb_007441_350 Hb_007441_350 Hb_026048_100 Hb_026048_100 Hb_007441_350--Hb_026048_100 Hb_002007_270 Hb_002007_270 Hb_007441_350--Hb_002007_270 Hb_007760_030 Hb_007760_030 Hb_007441_350--Hb_007760_030 Hb_063134_010 Hb_063134_010 Hb_007441_350--Hb_063134_010 Hb_011224_080 Hb_011224_080 Hb_007441_350--Hb_011224_080 Hb_000836_070 Hb_000836_070 Hb_007441_350--Hb_000836_070 Hb_003638_030 Hb_003638_030 Hb_026048_100--Hb_003638_030 Hb_066807_010 Hb_066807_010 Hb_026048_100--Hb_066807_010 Hb_006602_020 Hb_006602_020 Hb_026048_100--Hb_006602_020 Hb_000700_090 Hb_000700_090 Hb_026048_100--Hb_000700_090 Hb_000057_060 Hb_000057_060 Hb_026048_100--Hb_000057_060 Hb_000172_400 Hb_000172_400 Hb_026048_100--Hb_000172_400 Hb_004852_030 Hb_004852_030 Hb_002007_270--Hb_004852_030 Hb_001538_010 Hb_001538_010 Hb_002007_270--Hb_001538_010 Hb_002007_270--Hb_026048_100 Hb_000622_310 Hb_000622_310 Hb_002007_270--Hb_000622_310 Hb_003297_030 Hb_003297_030 Hb_002007_270--Hb_003297_030 Hb_002007_270--Hb_000172_400 Hb_000173_170 Hb_000173_170 Hb_007760_030--Hb_000173_170 Hb_007152_020 Hb_007152_020 Hb_007760_030--Hb_007152_020 Hb_001842_070 Hb_001842_070 Hb_007760_030--Hb_001842_070 Hb_000025_480 Hb_000025_480 Hb_007760_030--Hb_000025_480 Hb_006693_030 Hb_006693_030 Hb_007760_030--Hb_006693_030 Hb_007760_030--Hb_011224_080 Hb_007193_100 Hb_007193_100 Hb_063134_010--Hb_007193_100 Hb_029510_140 Hb_029510_140 Hb_063134_010--Hb_029510_140 Hb_003005_020 Hb_003005_020 Hb_063134_010--Hb_003005_020 Hb_000175_070 Hb_000175_070 Hb_063134_010--Hb_000175_070 Hb_000172_370 Hb_000172_370 Hb_063134_010--Hb_000172_370 Hb_000384_090 Hb_000384_090 Hb_063134_010--Hb_000384_090 Hb_011224_080--Hb_006693_030 Hb_000029_030 Hb_000029_030 Hb_011224_080--Hb_000029_030 Hb_002368_050 Hb_002368_050 Hb_011224_080--Hb_002368_050 Hb_002659_140 Hb_002659_140 Hb_011224_080--Hb_002659_140 Hb_168918_020 Hb_168918_020 Hb_011224_080--Hb_168918_020 Hb_000556_080 Hb_000556_080 Hb_011224_080--Hb_000556_080 Hb_005488_010 Hb_005488_010 Hb_000836_070--Hb_005488_010 Hb_004899_320 Hb_004899_320 Hb_000836_070--Hb_004899_320 Hb_000923_070 Hb_000923_070 Hb_000836_070--Hb_000923_070 Hb_008453_090 Hb_008453_090 Hb_000836_070--Hb_008453_090 Hb_010710_040 Hb_010710_040 Hb_000836_070--Hb_010710_040 Hb_003018_190 Hb_003018_190 Hb_000836_070--Hb_003018_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.3714 5.60425 4.40934 3.85674 21.9214 26.671
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.391 20.4972 25.8078 1.93818 4.07029

CAGE analysis