Hb_007290_040

Information

Type -
Description -
Location Contig7290: 62477-63511
Sequence    

Annotation

kegg
ID rcu:RCOM_0331410
description Histidine-containing phosphotransfer protein, putative (EC:1.3.1.74)
nr
ID XP_012066517.1
description PREDICTED: histidine-containing phosphotransfer protein 1-like [Jatropha curcas]
swissprot
ID Q6VAK4
description Histidine-containing phosphotransfer protein 1 OS=Oryza sativa subsp. japonica GN=HP1 PE=1 SV=1
trembl
ID B9T5M9
description Histidine-containing phosphotransfer protein, putative OS=Ricinus communis GN=RCOM_0331410 PE=4 SV=1
Gene Ontology
ID GO:0016023
description histidine-containing phosphotransfer protein 1-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007290_040 0.0 - - PREDICTED: histidine-containing phosphotransfer protein 1-like [Jatropha curcas]
2 Hb_004319_010 0.1107348824 - - PREDICTED: peroxidase 63-like [Jatropha curcas]
3 Hb_005211_170 0.1127006921 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
4 Hb_002307_150 0.1134430688 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA4-like [Jatropha curcas]
5 Hb_000445_260 0.1148687957 - - PREDICTED: uncharacterized protein LOC105127729 [Populus euphratica]
6 Hb_001136_080 0.1151163356 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
7 Hb_000333_140 0.120950808 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
8 Hb_006483_070 0.1285394734 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
9 Hb_010080_050 0.132411286 - - PREDICTED: uncharacterized protein LOC105635251 [Jatropha curcas]
10 Hb_011628_010 0.1349118096 - - tonoplast intrinsic protein, putative [Ricinus communis]
11 Hb_000310_040 0.1363506701 - - PREDICTED: adenine phosphoribosyltransferase 3 [Jatropha curcas]
12 Hb_002228_120 0.1386645079 - - potassium channel beta, putative [Ricinus communis]
13 Hb_004732_070 0.1414338211 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001635_140 0.1424154674 - - protein with unknown function [Ricinus communis]
15 Hb_016911_010 0.1466691507 - - hypothetical protein POPTR_0010s15010g [Populus trichocarpa]
16 Hb_009062_020 0.1483769739 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis melo]
17 Hb_039075_010 0.1505103389 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
18 Hb_015292_020 0.150737458 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
19 Hb_001856_210 0.1509570404 - - PREDICTED: uncharacterized protein LOC105644171 [Jatropha curcas]
20 Hb_000413_120 0.1518949002 - - PREDICTED: BTB/POZ domain-containing protein At3g22104-like [Jatropha curcas]

Gene co-expression network

sample Hb_007290_040 Hb_007290_040 Hb_004319_010 Hb_004319_010 Hb_007290_040--Hb_004319_010 Hb_005211_170 Hb_005211_170 Hb_007290_040--Hb_005211_170 Hb_002307_150 Hb_002307_150 Hb_007290_040--Hb_002307_150 Hb_000445_260 Hb_000445_260 Hb_007290_040--Hb_000445_260 Hb_001136_080 Hb_001136_080 Hb_007290_040--Hb_001136_080 Hb_000333_140 Hb_000333_140 Hb_007290_040--Hb_000333_140 Hb_010080_050 Hb_010080_050 Hb_004319_010--Hb_010080_050 Hb_004319_010--Hb_005211_170 Hb_004319_010--Hb_002307_150 Hb_004319_010--Hb_000445_260 Hb_004319_010--Hb_000333_140 Hb_005211_170--Hb_002307_150 Hb_005211_170--Hb_000333_140 Hb_005211_170--Hb_010080_050 Hb_005211_170--Hb_000445_260 Hb_000310_040 Hb_000310_040 Hb_005211_170--Hb_000310_040 Hb_011628_010 Hb_011628_010 Hb_005211_170--Hb_011628_010 Hb_002307_150--Hb_010080_050 Hb_002307_150--Hb_000333_140 Hb_002307_150--Hb_011628_010 Hb_001971_040 Hb_001971_040 Hb_002307_150--Hb_001971_040 Hb_002028_270 Hb_002028_270 Hb_002307_150--Hb_002028_270 Hb_000445_260--Hb_010080_050 Hb_001856_210 Hb_001856_210 Hb_000445_260--Hb_001856_210 Hb_003464_010 Hb_003464_010 Hb_000445_260--Hb_003464_010 Hb_000445_260--Hb_002307_150 Hb_000878_080 Hb_000878_080 Hb_000445_260--Hb_000878_080 Hb_001136_080--Hb_000333_140 Hb_016911_010 Hb_016911_010 Hb_001136_080--Hb_016911_010 Hb_009062_020 Hb_009062_020 Hb_001136_080--Hb_009062_020 Hb_001136_080--Hb_011628_010 Hb_006483_070 Hb_006483_070 Hb_001136_080--Hb_006483_070 Hb_001709_120 Hb_001709_120 Hb_001136_080--Hb_001709_120 Hb_000333_140--Hb_011628_010 Hb_015292_020 Hb_015292_020 Hb_000333_140--Hb_015292_020 Hb_000333_140--Hb_000310_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.18151 0.290343 3.73559 7.27365 0.0743997 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.146647 0 0.187326 0.521339

CAGE analysis