Hb_006570_060

Information

Type -
Description -
Location Contig6570: 20923-27501
Sequence    

Annotation

kegg
ID rcu:RCOM_1598180
description hypothetical protein
nr
ID XP_012073787.1
description PREDICTED: uncharacterized protein LOC105635332 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KYH6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08205 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52783: 20995-21372
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006570_060 0.0 - - PREDICTED: uncharacterized protein LOC105635332 [Jatropha curcas]
2 Hb_000173_270 0.0814926605 - - PREDICTED: mitogen-activated protein kinase 15 isoform X2 [Jatropha curcas]
3 Hb_000272_030 0.0881940508 - - PREDICTED: WD repeat-containing protein 76 isoform X1 [Jatropha curcas]
4 Hb_000260_410 0.0996454815 - - PREDICTED: protein LURP-one-related 8 [Jatropha curcas]
5 Hb_001143_120 0.1133340996 - - PREDICTED: uncharacterized protein LOC105638955 [Jatropha curcas]
6 Hb_004880_050 0.1180517056 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000659_040 0.1181804393 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
8 Hb_000941_090 0.119537316 - - PREDICTED: protein trichome birefringence [Jatropha curcas]
9 Hb_028227_040 0.1207783064 - - PREDICTED: uncharacterized protein LOC105645005 [Jatropha curcas]
10 Hb_005365_010 0.1228865445 - - PREDICTED: serine carboxypeptidase-like 20 [Jatropha curcas]
11 Hb_002838_010 0.1233748177 - - AGPase large subunit protein [Hevea brasiliensis]
12 Hb_001629_120 0.1242138884 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At4g27220 isoform X2 [Populus euphratica]
13 Hb_001789_120 0.1267437546 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Jatropha curcas]
14 Hb_044653_050 0.1272806117 - - PREDICTED: CTL-like protein DDB_G0274487 isoform X1 [Jatropha curcas]
15 Hb_000818_090 0.1298615786 - - glutamate receptor 3 plant, putative [Ricinus communis]
16 Hb_002311_280 0.1340464917 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
17 Hb_013394_120 0.1397720234 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Jatropha curcas]
18 Hb_001417_060 0.1405775594 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
19 Hb_017491_010 0.1406534545 - - PREDICTED: phosphoinositide phosphatase SAC2 isoform X1 [Jatropha curcas]
20 Hb_032779_010 0.1423072611 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_006570_060 Hb_006570_060 Hb_000173_270 Hb_000173_270 Hb_006570_060--Hb_000173_270 Hb_000272_030 Hb_000272_030 Hb_006570_060--Hb_000272_030 Hb_000260_410 Hb_000260_410 Hb_006570_060--Hb_000260_410 Hb_001143_120 Hb_001143_120 Hb_006570_060--Hb_001143_120 Hb_004880_050 Hb_004880_050 Hb_006570_060--Hb_004880_050 Hb_000659_040 Hb_000659_040 Hb_006570_060--Hb_000659_040 Hb_000173_270--Hb_000260_410 Hb_005365_010 Hb_005365_010 Hb_000173_270--Hb_005365_010 Hb_001629_120 Hb_001629_120 Hb_000173_270--Hb_001629_120 Hb_044653_050 Hb_044653_050 Hb_000173_270--Hb_044653_050 Hb_000173_270--Hb_000272_030 Hb_000272_030--Hb_000260_410 Hb_000941_090 Hb_000941_090 Hb_000272_030--Hb_000941_090 Hb_002838_010 Hb_002838_010 Hb_000272_030--Hb_002838_010 Hb_000107_090 Hb_000107_090 Hb_000272_030--Hb_000107_090 Hb_017491_010 Hb_017491_010 Hb_000260_410--Hb_017491_010 Hb_000260_410--Hb_001629_120 Hb_000260_410--Hb_000941_090 Hb_000818_090 Hb_000818_090 Hb_000260_410--Hb_000818_090 Hb_001143_120--Hb_000173_270 Hb_001301_260 Hb_001301_260 Hb_001143_120--Hb_001301_260 Hb_001143_120--Hb_005365_010 Hb_001143_120--Hb_044653_050 Hb_001143_120--Hb_002838_010 Hb_001143_120--Hb_000260_410 Hb_001789_120 Hb_001789_120 Hb_004880_050--Hb_001789_120 Hb_014700_030 Hb_014700_030 Hb_004880_050--Hb_014700_030 Hb_032779_010 Hb_032779_010 Hb_004880_050--Hb_032779_010 Hb_004880_050--Hb_000818_090 Hb_013394_120 Hb_013394_120 Hb_004880_050--Hb_013394_120 Hb_010222_060 Hb_010222_060 Hb_004880_050--Hb_010222_060 Hb_003147_040 Hb_003147_040 Hb_000659_040--Hb_003147_040 Hb_000363_250 Hb_000363_250 Hb_000659_040--Hb_000363_250 Hb_000659_040--Hb_000272_030 Hb_001318_100 Hb_001318_100 Hb_000659_040--Hb_001318_100 Hb_000856_200 Hb_000856_200 Hb_000659_040--Hb_000856_200 Hb_007894_070 Hb_007894_070 Hb_000659_040--Hb_007894_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00842162 2.89277 4.11891 3.97838 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.13385 0.255784 0.143192 0.860855 5.23608

CAGE analysis