Hb_005725_130

Information

Type -
Description -
Location Contig5725: 42721-48520
Sequence    

Annotation

kegg
ID vvi:100262573
description uncharacterized protein KIAA0930 homolog
nr
ID XP_012068181.1
description PREDICTED: uncharacterized protein KIAA0930 homolog isoform X2 [Jatropha curcas]
swissprot
ID Q801S4
description Uncharacterized protein KIAA0930 homolog OS=Xenopus laevis PE=2 SV=2
trembl
ID A0A067LAQ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15997 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49405: 42788-45778 , PASA_asmbl_49406: 45945-46184 , PASA_asmbl_49407: 46198-46745 , PASA_asmbl_49408: 46763-48509 , PASA_asmbl_49409: 47779-47939
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005725_130 0.0 - - PREDICTED: uncharacterized protein KIAA0930 homolog isoform X2 [Jatropha curcas]
2 Hb_003878_150 0.0534377882 - - PREDICTED: GPI mannosyltransferase 3 [Jatropha curcas]
3 Hb_001242_120 0.0636744068 - - PREDICTED: carboxypeptidase D [Jatropha curcas]
4 Hb_009569_040 0.0646301025 - - PREDICTED: uncharacterized protein LOC105635573 [Jatropha curcas]
5 Hb_000120_370 0.0671885888 - - type 2 diacylglycerol acyltransferase [Ricinus communis]
6 Hb_002928_090 0.0692874862 - - PREDICTED: metallocarboxypeptidase A-like protein TRV_02598 [Jatropha curcas]
7 Hb_001662_100 0.0720448645 - - PREDICTED: serine/threonine-protein kinase EDR1-like [Jatropha curcas]
8 Hb_012733_070 0.0763899091 - - PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial [Jatropha curcas]
9 Hb_002968_080 0.0764398709 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 5 [Jatropha curcas]
10 Hb_005357_160 0.0770007606 - - PREDICTED: probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B [Jatropha curcas]
11 Hb_001195_400 0.0771010596 - - glucose-6-phosphate isomerase, putative [Ricinus communis]
12 Hb_000359_210 0.0773347753 - - conserved hypothetical protein [Ricinus communis]
13 Hb_012733_040 0.0792045966 - - ATP-dependent clp protease ATP-binding subunit clpx, putative [Ricinus communis]
14 Hb_003883_060 0.0807552468 transcription factor TF Family: BSD PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [Jatropha curcas]
15 Hb_013726_090 0.0808195563 - - PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Jatropha curcas]
16 Hb_079526_040 0.0811726118 - - Conserved oligomeric Golgi complex component, putative [Ricinus communis]
17 Hb_109000_020 0.0829733222 - - PREDICTED: uncharacterized protein LOC105633730 [Jatropha curcas]
18 Hb_003206_110 0.0830557445 - - Putative 1-aminocyclopropane-1-carboxylate deaminase [Gossypium arboreum]
19 Hb_007481_010 0.0841009121 - - PREDICTED: TBC1 domain family member 22B [Jatropha curcas]
20 Hb_000787_160 0.0843055665 - - PREDICTED: GDP-mannose transporter GONST1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_005725_130 Hb_005725_130 Hb_003878_150 Hb_003878_150 Hb_005725_130--Hb_003878_150 Hb_001242_120 Hb_001242_120 Hb_005725_130--Hb_001242_120 Hb_009569_040 Hb_009569_040 Hb_005725_130--Hb_009569_040 Hb_000120_370 Hb_000120_370 Hb_005725_130--Hb_000120_370 Hb_002928_090 Hb_002928_090 Hb_005725_130--Hb_002928_090 Hb_001662_100 Hb_001662_100 Hb_005725_130--Hb_001662_100 Hb_109000_020 Hb_109000_020 Hb_003878_150--Hb_109000_020 Hb_003878_150--Hb_001662_100 Hb_000256_150 Hb_000256_150 Hb_003878_150--Hb_000256_150 Hb_003883_060 Hb_003883_060 Hb_003878_150--Hb_003883_060 Hb_001195_400 Hb_001195_400 Hb_003878_150--Hb_001195_400 Hb_012733_040 Hb_012733_040 Hb_001242_120--Hb_012733_040 Hb_001242_120--Hb_002928_090 Hb_002301_100 Hb_002301_100 Hb_001242_120--Hb_002301_100 Hb_001051_050 Hb_001051_050 Hb_001242_120--Hb_001051_050 Hb_001242_120--Hb_003878_150 Hb_009569_040--Hb_001662_100 Hb_009569_040--Hb_000256_150 Hb_000049_020 Hb_000049_020 Hb_009569_040--Hb_000049_020 Hb_007481_010 Hb_007481_010 Hb_009569_040--Hb_007481_010 Hb_002414_050 Hb_002414_050 Hb_009569_040--Hb_002414_050 Hb_000115_150 Hb_000115_150 Hb_000120_370--Hb_000115_150 Hb_001828_180 Hb_001828_180 Hb_000120_370--Hb_001828_180 Hb_000120_370--Hb_002301_100 Hb_000167_010 Hb_000167_010 Hb_000120_370--Hb_000167_010 Hb_005648_010 Hb_005648_010 Hb_000120_370--Hb_005648_010 Hb_000014_040 Hb_000014_040 Hb_002928_090--Hb_000014_040 Hb_002928_090--Hb_001051_050 Hb_000390_050 Hb_000390_050 Hb_002928_090--Hb_000390_050 Hb_002928_090--Hb_009569_040 Hb_001662_100--Hb_002414_050 Hb_002883_030 Hb_002883_030 Hb_001662_100--Hb_002883_030 Hb_003544_160 Hb_003544_160 Hb_001662_100--Hb_003544_160 Hb_000787_160 Hb_000787_160 Hb_001662_100--Hb_000787_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.98205 2.68298 5.18673 8.45242 3.92497 4.9493
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.563 4.1425 3.50682 7.40768 7.85602

CAGE analysis