Hb_004631_220

Information

Type -
Description -
Location Contig4631: 201056-202541
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004631_220 0.0 - - -
2 Hb_001277_220 0.2365188955 - - PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Jatropha curcas]
3 Hb_037226_010 0.2640522318 - - PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial-like [Jatropha curcas]
4 Hb_017987_070 0.2667007506 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT22-like [Jatropha curcas]
5 Hb_005298_010 0.2888778923 - - -
6 Hb_004129_130 0.2950196311 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
7 Hb_000009_580 0.2951907992 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os03g0620400-like [Jatropha curcas]
8 Hb_002073_040 0.2967875844 - - conserved hypothetical protein [Ricinus communis]
9 Hb_012395_220 0.3009517972 - - PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Jatropha curcas]
10 Hb_010315_050 0.3017131002 - - hypothetical protein JCGZ_25247 [Jatropha curcas]
11 Hb_128558_010 0.3052549056 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
12 Hb_005843_100 0.3084141436 - - PREDICTED: pentatricopeptide repeat-containing protein At5g39350-like [Jatropha curcas]
13 Hb_112399_010 0.3094422826 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
14 Hb_001195_680 0.310441638 - - PREDICTED: probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4 [Jatropha curcas]
15 Hb_005843_150 0.3105245645 transcription factor TF Family: HSF PREDICTED: heat shock factor protein HSF24 [Jatropha curcas]
16 Hb_031042_020 0.3108363147 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g47460 [Jatropha curcas]
17 Hb_000050_090 0.3110521949 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
18 Hb_026698_010 0.3117424277 - - 2,4-dienoyl-CoA reductase, putative [Ricinus communis]
19 Hb_004316_070 0.3128301577 - - E3 ubiquitin-protein ligase UPL5 -like protein [Gossypium arboreum]
20 Hb_025771_010 0.3133402478 - - hypothetical protein JCGZ_17178 [Jatropha curcas]

Gene co-expression network

sample Hb_004631_220 Hb_004631_220 Hb_001277_220 Hb_001277_220 Hb_004631_220--Hb_001277_220 Hb_037226_010 Hb_037226_010 Hb_004631_220--Hb_037226_010 Hb_017987_070 Hb_017987_070 Hb_004631_220--Hb_017987_070 Hb_005298_010 Hb_005298_010 Hb_004631_220--Hb_005298_010 Hb_004129_130 Hb_004129_130 Hb_004631_220--Hb_004129_130 Hb_000009_580 Hb_000009_580 Hb_004631_220--Hb_000009_580 Hb_010315_050 Hb_010315_050 Hb_001277_220--Hb_010315_050 Hb_001277_220--Hb_000009_580 Hb_002073_040 Hb_002073_040 Hb_001277_220--Hb_002073_040 Hb_000059_040 Hb_000059_040 Hb_001277_220--Hb_000059_040 Hb_001318_030 Hb_001318_030 Hb_001277_220--Hb_001318_030 Hb_026698_010 Hb_026698_010 Hb_001277_220--Hb_026698_010 Hb_008948_040 Hb_008948_040 Hb_037226_010--Hb_008948_040 Hb_003906_090 Hb_003906_090 Hb_037226_010--Hb_003906_090 Hb_007075_050 Hb_007075_050 Hb_037226_010--Hb_007075_050 Hb_130194_010 Hb_130194_010 Hb_037226_010--Hb_130194_010 Hb_101808_010 Hb_101808_010 Hb_037226_010--Hb_101808_010 Hb_004690_040 Hb_004690_040 Hb_037226_010--Hb_004690_040 Hb_017987_070--Hb_026698_010 Hb_000340_010 Hb_000340_010 Hb_017987_070--Hb_000340_010 Hb_001274_020 Hb_001274_020 Hb_017987_070--Hb_001274_020 Hb_000261_490 Hb_000261_490 Hb_017987_070--Hb_000261_490 Hb_169325_010 Hb_169325_010 Hb_017987_070--Hb_169325_010 Hb_002783_230 Hb_002783_230 Hb_017987_070--Hb_002783_230 Hb_112399_010 Hb_112399_010 Hb_005298_010--Hb_112399_010 Hb_005625_060 Hb_005625_060 Hb_005298_010--Hb_005625_060 Hb_096225_020 Hb_096225_020 Hb_005298_010--Hb_096225_020 Hb_001184_110 Hb_001184_110 Hb_005298_010--Hb_001184_110 Hb_000436_010 Hb_000436_010 Hb_005298_010--Hb_000436_010 Hb_169246_010 Hb_169246_010 Hb_005298_010--Hb_169246_010 Hb_002904_030 Hb_002904_030 Hb_004129_130--Hb_002904_030 Hb_004734_060 Hb_004734_060 Hb_004129_130--Hb_004734_060 Hb_023827_040 Hb_023827_040 Hb_004129_130--Hb_023827_040 Hb_001516_100 Hb_001516_100 Hb_004129_130--Hb_001516_100 Hb_001584_170 Hb_001584_170 Hb_004129_130--Hb_001584_170 Hb_004129_130--Hb_001274_020 Hb_003106_040 Hb_003106_040 Hb_000009_580--Hb_003106_040 Hb_000665_010 Hb_000665_010 Hb_000009_580--Hb_000665_010 Hb_003517_060 Hb_003517_060 Hb_000009_580--Hb_003517_060 Hb_096224_040 Hb_096224_040 Hb_000009_580--Hb_096224_040 Hb_001053_030 Hb_001053_030 Hb_000009_580--Hb_001053_030 Hb_000336_140 Hb_000336_140 Hb_000009_580--Hb_000336_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.130895 0.226096 0 0 0.127695 0.11804
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.241769 0.201137 0.0506862 0

CAGE analysis