Hb_004361_020

Information

Type -
Description -
Location Contig4361: 30742-33544
Sequence    

Annotation

kegg
ID cit:102625775
description uncharacterized LOC102625775
nr
ID XP_006467697.1
description PREDICTED: uncharacterized protein LOC102625775 [Citrus sinensis]
swissprot
ID -
description -
trembl
ID A0A087GPJ8
description Uncharacterized protein OS=Arabis alpina GN=AALP_AA6G160500 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004361_020 0.0 - - PREDICTED: uncharacterized protein LOC102625775 [Citrus sinensis]
2 Hb_001709_130 0.1992538027 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
3 Hb_001019_120 0.2312009237 - - PREDICTED: uncharacterized protein LOC105639315 [Jatropha curcas]
4 Hb_183574_010 0.2459624756 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
5 Hb_036702_010 0.2475116663 - - phosphoprotein phosphatase, putative [Ricinus communis]
6 Hb_000236_090 0.253053296 - - hypothetical protein EUGRSUZ_H00030 [Eucalyptus grandis]
7 Hb_021068_010 0.260169446 - - PREDICTED: MADS-box transcription factor 23-like isoform X1 [Jatropha curcas]
8 Hb_032920_100 0.2678495423 - - hypothetical protein POPTR_0002s00940g, partial [Populus trichocarpa]
9 Hb_178884_010 0.2769943567 - - putative disease resistance gene NBS-LRR family protein [Populus trichocarpa]
10 Hb_045870_010 0.2816761759 - - -
11 Hb_000330_160 0.2881948927 - - hypothetical protein JCGZ_04462 [Jatropha curcas]
12 Hb_000330_080 0.2894386842 - - auxilin, putative [Ricinus communis]
13 Hb_008616_030 0.2917127132 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-10 isoform X1 [Jatropha curcas]
14 Hb_000078_170 0.291985795 - - -
15 Hb_002742_070 0.2925450274 - - PREDICTED: villin-4-like [Jatropha curcas]
16 Hb_001009_100 0.2939948323 - - -
17 Hb_003492_010 0.2941891099 - - DREPP plasma membrane polypeptide family protein [Populus trichocarpa]
18 Hb_067776_020 0.2973112676 - - PREDICTED: signal recognition particle 54 kDa protein, chloroplastic [Jatropha curcas]
19 Hb_005356_060 0.2981596309 - - hypothetical protein POPTR_0013s14620g, partial [Populus trichocarpa]
20 Hb_000258_020 0.2995574031 - - PREDICTED: RING-H2 finger protein ATL74 [Jatropha curcas]

Gene co-expression network

sample Hb_004361_020 Hb_004361_020 Hb_001709_130 Hb_001709_130 Hb_004361_020--Hb_001709_130 Hb_001019_120 Hb_001019_120 Hb_004361_020--Hb_001019_120 Hb_183574_010 Hb_183574_010 Hb_004361_020--Hb_183574_010 Hb_036702_010 Hb_036702_010 Hb_004361_020--Hb_036702_010 Hb_000236_090 Hb_000236_090 Hb_004361_020--Hb_000236_090 Hb_021068_010 Hb_021068_010 Hb_004361_020--Hb_021068_010 Hb_000078_170 Hb_000078_170 Hb_001709_130--Hb_000078_170 Hb_000330_080 Hb_000330_080 Hb_001709_130--Hb_000330_080 Hb_011639_150 Hb_011639_150 Hb_001709_130--Hb_011639_150 Hb_004884_020 Hb_004884_020 Hb_001709_130--Hb_004884_020 Hb_001009_100 Hb_001009_100 Hb_001709_130--Hb_001009_100 Hb_001019_120--Hb_036702_010 Hb_067776_020 Hb_067776_020 Hb_001019_120--Hb_067776_020 Hb_002159_030 Hb_002159_030 Hb_001019_120--Hb_002159_030 Hb_004324_240 Hb_004324_240 Hb_001019_120--Hb_004324_240 Hb_007933_020 Hb_007933_020 Hb_001019_120--Hb_007933_020 Hb_004987_070 Hb_004987_070 Hb_001019_120--Hb_004987_070 Hb_183574_010--Hb_001709_130 Hb_183574_010--Hb_021068_010 Hb_005989_010 Hb_005989_010 Hb_183574_010--Hb_005989_010 Hb_047661_010 Hb_047661_010 Hb_183574_010--Hb_047661_010 Hb_005241_020 Hb_005241_020 Hb_183574_010--Hb_005241_020 Hb_001014_130 Hb_001014_130 Hb_036702_010--Hb_001014_130 Hb_002742_070 Hb_002742_070 Hb_036702_010--Hb_002742_070 Hb_011953_030 Hb_011953_030 Hb_036702_010--Hb_011953_030 Hb_000330_160 Hb_000330_160 Hb_036702_010--Hb_000330_160 Hb_000062_060 Hb_000062_060 Hb_036702_010--Hb_000062_060 Hb_010128_120 Hb_010128_120 Hb_000236_090--Hb_010128_120 Hb_000504_150 Hb_000504_150 Hb_000236_090--Hb_000504_150 Hb_007348_040 Hb_007348_040 Hb_000236_090--Hb_007348_040 Hb_000236_090--Hb_001009_100 Hb_002084_040 Hb_002084_040 Hb_000236_090--Hb_002084_040 Hb_000108_080 Hb_000108_080 Hb_000236_090--Hb_000108_080 Hb_021068_010--Hb_001019_120 Hb_032920_100 Hb_032920_100 Hb_021068_010--Hb_032920_100 Hb_009973_020 Hb_009973_020 Hb_021068_010--Hb_009973_020 Hb_021068_010--Hb_001709_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.154895 0.0981398 0 0.0757483 0.228486 0.455152
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.057531 0.276056

CAGE analysis