Hb_004324_410

Information

Type -
Description -
Location Contig4324: 282656-285532
Sequence    

Annotation

kegg
ID cic:CICLE_v10017769mg
description hypothetical protein
nr
ID KDP22194.1
description hypothetical protein JCGZ_26025 [Jatropha curcas]
swissprot
ID C0LGQ5
description LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1
trembl
ID A0A067JRP9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26025 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004324_410 0.0 - - hypothetical protein JCGZ_26025 [Jatropha curcas]
2 Hb_001363_030 0.167916119 - - PREDICTED: UDP-glycosyltransferase 74F2-like [Populus euphratica]
3 Hb_004970_130 0.1692233569 - - PREDICTED: uncharacterized protein LOC105633891 [Jatropha curcas]
4 Hb_001365_040 0.1750005271 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 isoform X2 [Populus euphratica]
5 Hb_000009_260 0.1792604659 - - PREDICTED: probable vacuolar amino acid transporter YPQ1 isoform X1 [Jatropha curcas]
6 Hb_002025_370 0.1816375322 - - monooxygenase, putative [Ricinus communis]
7 Hb_001810_010 0.1819665992 - - PREDICTED: wall-associated receptor kinase-like 1 [Nelumbo nucifera]
8 Hb_012268_010 0.1836495021 - - glutamic acid-rich protein [Manihot esculenta]
9 Hb_000940_020 0.1843487191 - - hypothetical protein POPTR_0004s17500g [Populus trichocarpa]
10 Hb_000111_130 0.1848897403 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
11 Hb_005396_100 0.1894580893 - - conserved hypothetical protein [Ricinus communis]
12 Hb_017987_080 0.1898534548 - - Uncharacterized protein TCM_001832 [Theobroma cacao]
13 Hb_005054_300 0.1899724714 - - aquaporin [Hevea brasiliensis]
14 Hb_001363_010 0.1923965257 - - hypothetical protein CISIN_1g027763mg [Citrus sinensis]
15 Hb_000345_190 0.1925112077 transcription factor TF Family: C2H2 hypothetical protein POPTR_0005s02730g [Populus trichocarpa]
16 Hb_001376_020 0.1928258121 - - hypothetical protein JCGZ_01547 [Jatropha curcas]
17 Hb_007371_020 0.1940806523 - - PREDICTED: ent-kaurenoic acid oxidase 1-like isoform X1 [Jatropha curcas]
18 Hb_001013_010 0.1943225888 - - cytochrome P450, putative [Ricinus communis]
19 Hb_000003_620 0.1946485604 - - PREDICTED: ABC transporter G family member 29-like [Jatropha curcas]
20 Hb_000035_360 0.1958953774 - - PREDICTED: VQ motif-containing protein 31-like [Jatropha curcas]

Gene co-expression network

sample Hb_004324_410 Hb_004324_410 Hb_001363_030 Hb_001363_030 Hb_004324_410--Hb_001363_030 Hb_004970_130 Hb_004970_130 Hb_004324_410--Hb_004970_130 Hb_001365_040 Hb_001365_040 Hb_004324_410--Hb_001365_040 Hb_000009_260 Hb_000009_260 Hb_004324_410--Hb_000009_260 Hb_002025_370 Hb_002025_370 Hb_004324_410--Hb_002025_370 Hb_001810_010 Hb_001810_010 Hb_004324_410--Hb_001810_010 Hb_001363_030--Hb_001365_040 Hb_000003_620 Hb_000003_620 Hb_001363_030--Hb_000003_620 Hb_009778_030 Hb_009778_030 Hb_001363_030--Hb_009778_030 Hb_001363_030--Hb_004970_130 Hb_118777_010 Hb_118777_010 Hb_001363_030--Hb_118777_010 Hb_000111_130 Hb_000111_130 Hb_001363_030--Hb_000111_130 Hb_004970_130--Hb_001365_040 Hb_001013_010 Hb_001013_010 Hb_004970_130--Hb_001013_010 Hb_004970_130--Hb_009778_030 Hb_169388_010 Hb_169388_010 Hb_004970_130--Hb_169388_010 Hb_004970_130--Hb_000003_620 Hb_001365_040--Hb_000111_130 Hb_001365_040--Hb_001013_010 Hb_001365_040--Hb_000003_620 Hb_001365_040--Hb_002025_370 Hb_001365_040--Hb_009778_030 Hb_004041_070 Hb_004041_070 Hb_000009_260--Hb_004041_070 Hb_003793_020 Hb_003793_020 Hb_000009_260--Hb_003793_020 Hb_102408_010 Hb_102408_010 Hb_000009_260--Hb_102408_010 Hb_004044_060 Hb_004044_060 Hb_000009_260--Hb_004044_060 Hb_012278_010 Hb_012278_010 Hb_000009_260--Hb_012278_010 Hb_039650_010 Hb_039650_010 Hb_002025_370--Hb_039650_010 Hb_002025_370--Hb_000111_130 Hb_004940_090 Hb_004940_090 Hb_002025_370--Hb_004940_090 Hb_001274_040 Hb_001274_040 Hb_002025_370--Hb_001274_040 Hb_008707_020 Hb_008707_020 Hb_002025_370--Hb_008707_020 Hb_012268_010 Hb_012268_010 Hb_001810_010--Hb_012268_010 Hb_000940_020 Hb_000940_020 Hb_001810_010--Hb_000940_020 Hb_002217_440 Hb_002217_440 Hb_001810_010--Hb_002217_440 Hb_005396_100 Hb_005396_100 Hb_001810_010--Hb_005396_100 Hb_001363_010 Hb_001363_010 Hb_001810_010--Hb_001363_010 Hb_000345_190 Hb_000345_190 Hb_001810_010--Hb_000345_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.607662 0.0148667 0.0196587 0.0438541 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.146939 0.0254711

CAGE analysis