Hb_005396_100

Information

Type -
Description -
Location Contig5396: 97505-98296
Sequence    

Annotation

kegg
ID rcu:RCOM_0704460
description hypothetical protein
nr
ID XP_002524384.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID O22227
description Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana GN=MIZ1 PE=1 SV=1
trembl
ID B9SEG5
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0704460 PE=4 SV=1
Gene Ontology
ID GO:0009506
description protein mizu-kussei 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005396_100 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001363_010 0.0614799031 - - hypothetical protein CISIN_1g027763mg [Citrus sinensis]
3 Hb_000977_160 0.0741887748 - - Serine-threonine protein kinase, plant-type, putative [Theobroma cacao]
4 Hb_000233_060 0.1034724348 - - hypothetical protein JCGZ_14793 [Jatropha curcas]
5 Hb_007785_020 0.1048429307 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
6 Hb_002067_110 0.1052612323 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Populus euphratica]
7 Hb_000345_190 0.1143669049 transcription factor TF Family: C2H2 hypothetical protein POPTR_0005s02730g [Populus trichocarpa]
8 Hb_045810_010 0.1176151186 - - PREDICTED: laccase-12-like [Jatropha curcas]
9 Hb_000035_360 0.1180287744 - - PREDICTED: VQ motif-containing protein 31-like [Jatropha curcas]
10 Hb_000844_020 0.1192294823 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF1.6 [Jatropha curcas]
11 Hb_135811_020 0.1199976958 - - hypothetical protein JCGZ_19965 [Jatropha curcas]
12 Hb_012268_010 0.1239417929 - - glutamic acid-rich protein [Manihot esculenta]
13 Hb_000535_030 0.1263250979 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
14 Hb_006353_010 0.1276838656 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105634775 [Jatropha curcas]
15 Hb_003851_050 0.1288521264 - - oligopeptide transporter, putative [Ricinus communis]
16 Hb_001365_040 0.1314237743 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 isoform X2 [Populus euphratica]
17 Hb_001013_010 0.1330740544 - - cytochrome P450, putative [Ricinus communis]
18 Hb_150643_010 0.1345914984 - - lipid binding protein, putative [Ricinus communis]
19 Hb_001810_010 0.1374710974 - - PREDICTED: wall-associated receptor kinase-like 1 [Nelumbo nucifera]
20 Hb_039814_010 0.1390687601 - - hypothetical protein JCGZ_05023 [Jatropha curcas]

Gene co-expression network

sample Hb_005396_100 Hb_005396_100 Hb_001363_010 Hb_001363_010 Hb_005396_100--Hb_001363_010 Hb_000977_160 Hb_000977_160 Hb_005396_100--Hb_000977_160 Hb_000233_060 Hb_000233_060 Hb_005396_100--Hb_000233_060 Hb_007785_020 Hb_007785_020 Hb_005396_100--Hb_007785_020 Hb_002067_110 Hb_002067_110 Hb_005396_100--Hb_002067_110 Hb_000345_190 Hb_000345_190 Hb_005396_100--Hb_000345_190 Hb_001363_010--Hb_000977_160 Hb_000535_030 Hb_000535_030 Hb_001363_010--Hb_000535_030 Hb_003385_090 Hb_003385_090 Hb_001363_010--Hb_003385_090 Hb_032651_060 Hb_032651_060 Hb_001363_010--Hb_032651_060 Hb_012268_010 Hb_012268_010 Hb_001363_010--Hb_012268_010 Hb_000977_160--Hb_002067_110 Hb_006353_010 Hb_006353_010 Hb_000977_160--Hb_006353_010 Hb_000844_020 Hb_000844_020 Hb_000977_160--Hb_000844_020 Hb_123238_010 Hb_123238_010 Hb_000977_160--Hb_123238_010 Hb_000035_360 Hb_000035_360 Hb_000233_060--Hb_000035_360 Hb_066262_010 Hb_066262_010 Hb_000233_060--Hb_066262_010 Hb_001331_050 Hb_001331_050 Hb_000233_060--Hb_001331_050 Hb_066262_020 Hb_066262_020 Hb_000233_060--Hb_066262_020 Hb_011924_030 Hb_011924_030 Hb_000233_060--Hb_011924_030 Hb_000233_060--Hb_002067_110 Hb_045810_010 Hb_045810_010 Hb_007785_020--Hb_045810_010 Hb_007785_020--Hb_002067_110 Hb_007785_020--Hb_000844_020 Hb_007785_020--Hb_001331_050 Hb_007785_020--Hb_066262_020 Hb_150643_010 Hb_150643_010 Hb_007785_020--Hb_150643_010 Hb_002067_110--Hb_000844_020 Hb_002067_110--Hb_066262_020 Hb_064855_010 Hb_064855_010 Hb_002067_110--Hb_064855_010 Hb_002067_110--Hb_045810_010 Hb_001271_040 Hb_001271_040 Hb_002067_110--Hb_001271_040 Hb_000532_060 Hb_000532_060 Hb_000345_190--Hb_000532_060 Hb_046117_050 Hb_046117_050 Hb_000345_190--Hb_046117_050 Hb_000170_230 Hb_000170_230 Hb_000345_190--Hb_000170_230 Hb_135811_020 Hb_135811_020 Hb_000345_190--Hb_135811_020 Hb_106969_010 Hb_106969_010 Hb_000345_190--Hb_106969_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0670688 30.7295 0.0671555 0.870644 0.0278761 0.0361824
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0537772 0 9.3413 0.539209

CAGE analysis