Hb_004161_010

Information

Type -
Description -
Location Contig4161: 2962-8359
Sequence    

Annotation

kegg
ID vvi:100257888
description cysteine-rich receptor-like protein kinase 10
nr
ID KDP20807.1
description hypothetical protein JCGZ_21278 [Jatropha curcas]
swissprot
ID Q9M0X5
description Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=3 SV=1
trembl
ID A0A067JAL5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21278 PE=3 SV=1
Gene Ontology
ID GO:0004674
description atp binding

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004161_010 0.0 - - hypothetical protein JCGZ_21278 [Jatropha curcas]
2 Hb_002701_140 0.0955416807 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 3 [Jatropha curcas]
3 Hb_001437_200 0.0975279039 - - PREDICTED: UDP-glycosyltransferase 86A2 [Jatropha curcas]
4 Hb_004656_030 0.0985642666 - - putative pectin methylesterase family protein [Populus trichocarpa]
5 Hb_027913_010 0.1006521064 - - ankyrin repeat-containing protein, putative [Ricinus communis]
6 Hb_000656_360 0.1063421697 - - PREDICTED: cytochrome P450 71A1-like [Jatropha curcas]
7 Hb_003847_140 0.1119885271 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]
8 Hb_000627_140 0.1225053691 - - ATP binding protein, putative [Ricinus communis]
9 Hb_133646_010 0.1239883218 - - hypothetical protein RCOM_1044030 [Ricinus communis]
10 Hb_029866_140 0.1248184306 - - PREDICTED: hevamine-A [Jatropha curcas]
11 Hb_000336_160 0.1255803442 - - ATP binding protein, putative [Ricinus communis]
12 Hb_001749_020 0.1280214099 - - hypothetical protein CISIN_1g042220mg, partial [Citrus sinensis]
13 Hb_048653_040 0.1349851996 - - ankyrin repeat family protein [Populus trichocarpa]
14 Hb_000369_150 0.135791473 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_20185 [Jatropha curcas]
15 Hb_000277_020 0.1368381081 - - hypothetical protein JCGZ_08656 [Jatropha curcas]
16 Hb_119441_010 0.1381665953 - - hypothetical protein CISIN_1g0477971mg, partial [Citrus sinensis]
17 Hb_176149_010 0.1399705803 - - hypothetical protein JCGZ_16793 [Jatropha curcas]
18 Hb_000879_100 0.1424717154 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
19 Hb_001190_020 0.1457219047 - - ankyrin repeat-containing protein, putative [Ricinus communis]
20 Hb_005081_060 0.1462089631 - - hypothetical protein EUGRSUZ_C00833 [Eucalyptus grandis]

Gene co-expression network

sample Hb_004161_010 Hb_004161_010 Hb_002701_140 Hb_002701_140 Hb_004161_010--Hb_002701_140 Hb_001437_200 Hb_001437_200 Hb_004161_010--Hb_001437_200 Hb_004656_030 Hb_004656_030 Hb_004161_010--Hb_004656_030 Hb_027913_010 Hb_027913_010 Hb_004161_010--Hb_027913_010 Hb_000656_360 Hb_000656_360 Hb_004161_010--Hb_000656_360 Hb_003847_140 Hb_003847_140 Hb_004161_010--Hb_003847_140 Hb_000277_020 Hb_000277_020 Hb_002701_140--Hb_000277_020 Hb_000940_020 Hb_000940_020 Hb_002701_140--Hb_000940_020 Hb_000825_040 Hb_000825_040 Hb_002701_140--Hb_000825_040 Hb_002701_140--Hb_003847_140 Hb_002701_140--Hb_000656_360 Hb_001437_200--Hb_027913_010 Hb_001437_200--Hb_004656_030 Hb_001437_200--Hb_003847_140 Hb_005081_060 Hb_005081_060 Hb_001437_200--Hb_005081_060 Hb_000039_100 Hb_000039_100 Hb_001437_200--Hb_000039_100 Hb_004656_030--Hb_027913_010 Hb_022630_010 Hb_022630_010 Hb_004656_030--Hb_022630_010 Hb_004656_030--Hb_000656_360 Hb_004656_030--Hb_003847_140 Hb_078477_010 Hb_078477_010 Hb_004656_030--Hb_078477_010 Hb_001749_020 Hb_001749_020 Hb_004656_030--Hb_001749_020 Hb_001190_020 Hb_001190_020 Hb_027913_010--Hb_001190_020 Hb_027913_010--Hb_022630_010 Hb_027913_010--Hb_000656_360 Hb_027913_010--Hb_078477_010 Hb_000656_360--Hb_003847_140 Hb_029866_140 Hb_029866_140 Hb_000656_360--Hb_029866_140 Hb_176149_010 Hb_176149_010 Hb_000656_360--Hb_176149_010 Hb_066262_010 Hb_066262_010 Hb_000656_360--Hb_066262_010 Hb_119441_010 Hb_119441_010 Hb_000656_360--Hb_119441_010 Hb_000369_150 Hb_000369_150 Hb_000656_360--Hb_000369_150 Hb_003847_140--Hb_066262_010 Hb_008707_020 Hb_008707_020 Hb_003847_140--Hb_008707_020 Hb_003847_140--Hb_005081_060 Hb_011924_030 Hb_011924_030 Hb_003847_140--Hb_011924_030 Hb_003847_140--Hb_029866_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.42728 0.0539243 0.215581 0.0344345 0.0152882
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.198633 0

CAGE analysis