Hb_003835_050

Information

Type -
Description -
Location Contig3835: 67156-68046
Sequence    

Annotation

kegg
ID fve:101307349
description putative UDP-rhamnose:rhamnosyltransferase 1-like
nr
ID XP_003607534.1
description Anthocyanidin 3-O-glucosyltransferase [Medicago truncatula]
swissprot
ID -
description -
trembl
ID M0TEB5
description Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1
Gene Ontology
ID GO:0016758
description udp-glycosyltransferase 91a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003835_050 0.0 - - Anthocyanidin 3-O-glucosyltransferase [Medicago truncatula]
2 Hb_155384_010 0.1494057356 - - -
3 Hb_078001_010 0.2838405869 - - Uncharacterized protein TCM_000398 [Theobroma cacao]
4 Hb_011316_120 0.3101739109 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH118-like [Jatropha curcas]
5 Hb_000025_430 0.310712042 transcription factor TF Family: SRS transcription factor, putative [Ricinus communis]
6 Hb_008779_010 0.3131718561 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
7 Hb_008643_010 0.3140072242 - - hypothetical protein JCGZ_04298 [Jatropha curcas]
8 Hb_000455_100 0.3172764808 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
9 Hb_004800_170 0.331858141 - - PREDICTED: cytochrome P450 90B1 [Jatropha curcas]
10 Hb_000084_040 0.3352656525 - - hypothetical protein RCOM_1007940 [Ricinus communis]
11 Hb_001956_030 0.3391136276 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Populus euphratica]
12 Hb_000056_330 0.3463819967 - - unnamed protein product [Vitis vinifera]
13 Hb_000912_020 0.3505840318 - - PREDICTED: uncharacterized protein LOC105645039 [Jatropha curcas]
14 Hb_001726_030 0.3513629763 - - Ferulic acid 5-hydroxylase 1 [Theobroma cacao]
15 Hb_001638_220 0.3517124894 - - conserved hypothetical protein [Ricinus communis]
16 Hb_054362_010 0.3613896381 - - PREDICTED: uncharacterized protein LOC105650428 [Jatropha curcas]
17 Hb_002918_230 0.3624492265 - - PREDICTED: probable glutathione S-transferase [Gossypium raimondii]
18 Hb_000160_100 0.3692605704 - - PREDICTED: uncharacterized transporter YBR287W-like [Populus euphratica]
19 Hb_127993_010 0.372430178 - - PREDICTED: choline monooxygenase, chloroplastic isoform X4 [Jatropha curcas]
20 Hb_001279_160 0.3727231181 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_003835_050 Hb_003835_050 Hb_155384_010 Hb_155384_010 Hb_003835_050--Hb_155384_010 Hb_078001_010 Hb_078001_010 Hb_003835_050--Hb_078001_010 Hb_011316_120 Hb_011316_120 Hb_003835_050--Hb_011316_120 Hb_000025_430 Hb_000025_430 Hb_003835_050--Hb_000025_430 Hb_008779_010 Hb_008779_010 Hb_003835_050--Hb_008779_010 Hb_008643_010 Hb_008643_010 Hb_003835_050--Hb_008643_010 Hb_155384_010--Hb_011316_120 Hb_000084_040 Hb_000084_040 Hb_155384_010--Hb_000084_040 Hb_054362_010 Hb_054362_010 Hb_155384_010--Hb_054362_010 Hb_127993_010 Hb_127993_010 Hb_155384_010--Hb_127993_010 Hb_155384_010--Hb_008779_010 Hb_078001_010--Hb_000025_430 Hb_005439_040 Hb_005439_040 Hb_078001_010--Hb_005439_040 Hb_078001_010--Hb_011316_120 Hb_001946_030 Hb_001946_030 Hb_078001_010--Hb_001946_030 Hb_078001_010--Hb_155384_010 Hb_011316_120--Hb_000084_040 Hb_000912_020 Hb_000912_020 Hb_011316_120--Hb_000912_020 Hb_004208_100 Hb_004208_100 Hb_011316_120--Hb_004208_100 Hb_008516_040 Hb_008516_040 Hb_011316_120--Hb_008516_040 Hb_004157_110 Hb_004157_110 Hb_011316_120--Hb_004157_110 Hb_001565_110 Hb_001565_110 Hb_000025_430--Hb_001565_110 Hb_002301_390 Hb_002301_390 Hb_000025_430--Hb_002301_390 Hb_000005_250 Hb_000005_250 Hb_000025_430--Hb_000005_250 Hb_094437_060 Hb_094437_060 Hb_000025_430--Hb_094437_060 Hb_004800_170 Hb_004800_170 Hb_000025_430--Hb_004800_170 Hb_008779_010--Hb_008643_010 Hb_001638_220 Hb_001638_220 Hb_008779_010--Hb_001638_220 Hb_008779_010--Hb_054362_010 Hb_006683_010 Hb_006683_010 Hb_008779_010--Hb_006683_010 Hb_000455_100 Hb_000455_100 Hb_008779_010--Hb_000455_100 Hb_008779_010--Hb_127993_010 Hb_008643_010--Hb_001638_220 Hb_008643_010--Hb_054362_010 Hb_008643_010--Hb_006683_010 Hb_008643_010--Hb_000455_100 Hb_008643_010--Hb_127993_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0241863 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.199156 0 0.28359 0.718058 0

CAGE analysis