Hb_155384_010

Information

Type -
Description -
Location Contig155384: 763-1018
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_155384_010 0.0 - - -
2 Hb_003835_050 0.1494057356 - - Anthocyanidin 3-O-glucosyltransferase [Medicago truncatula]
3 Hb_011316_120 0.2464529341 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH118-like [Jatropha curcas]
4 Hb_000084_040 0.2579646604 - - hypothetical protein RCOM_1007940 [Ricinus communis]
5 Hb_054362_010 0.2775308136 - - PREDICTED: uncharacterized protein LOC105650428 [Jatropha curcas]
6 Hb_127993_010 0.2840955075 - - PREDICTED: choline monooxygenase, chloroplastic isoform X4 [Jatropha curcas]
7 Hb_008779_010 0.2968582068 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
8 Hb_078001_010 0.2984179845 - - Uncharacterized protein TCM_000398 [Theobroma cacao]
9 Hb_008643_010 0.3019693562 - - hypothetical protein JCGZ_04298 [Jatropha curcas]
10 Hb_169574_010 0.3023358381 - - PREDICTED: uncharacterized protein LOC104120373 [Nicotiana tomentosiformis]
11 Hb_048874_010 0.3034784428 - - hypothetical protein POPTR_0016s10870g [Populus trichocarpa]
12 Hb_005799_040 0.306359511 - - PREDICTED: bidirectional sugar transporter SWEET4-like isoform X1 [Gossypium raimondii]
13 Hb_008246_050 0.3063810343 - - -
14 Hb_001956_030 0.3203041625 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Populus euphratica]
15 Hb_004157_110 0.3246676216 - - -
16 Hb_000912_020 0.328744426 - - PREDICTED: uncharacterized protein LOC105645039 [Jatropha curcas]
17 Hb_005285_010 0.3296377227 - - PREDICTED: ent-kaurenoic acid oxidase 1-like isoform X1 [Jatropha curcas]
18 Hb_000455_100 0.331685737 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
19 Hb_006683_010 0.3361287248 - - cell wall invertase [Manihot esculenta]
20 Hb_001638_220 0.338138758 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_155384_010 Hb_155384_010 Hb_003835_050 Hb_003835_050 Hb_155384_010--Hb_003835_050 Hb_011316_120 Hb_011316_120 Hb_155384_010--Hb_011316_120 Hb_000084_040 Hb_000084_040 Hb_155384_010--Hb_000084_040 Hb_054362_010 Hb_054362_010 Hb_155384_010--Hb_054362_010 Hb_127993_010 Hb_127993_010 Hb_155384_010--Hb_127993_010 Hb_008779_010 Hb_008779_010 Hb_155384_010--Hb_008779_010 Hb_078001_010 Hb_078001_010 Hb_003835_050--Hb_078001_010 Hb_003835_050--Hb_011316_120 Hb_000025_430 Hb_000025_430 Hb_003835_050--Hb_000025_430 Hb_003835_050--Hb_008779_010 Hb_008643_010 Hb_008643_010 Hb_003835_050--Hb_008643_010 Hb_011316_120--Hb_000084_040 Hb_000912_020 Hb_000912_020 Hb_011316_120--Hb_000912_020 Hb_004208_100 Hb_004208_100 Hb_011316_120--Hb_004208_100 Hb_008516_040 Hb_008516_040 Hb_011316_120--Hb_008516_040 Hb_004157_110 Hb_004157_110 Hb_011316_120--Hb_004157_110 Hb_080653_010 Hb_080653_010 Hb_000084_040--Hb_080653_010 Hb_005285_010 Hb_005285_010 Hb_000084_040--Hb_005285_010 Hb_000084_040--Hb_004157_110 Hb_000084_040--Hb_008516_040 Hb_054362_010--Hb_127993_010 Hb_169574_010 Hb_169574_010 Hb_054362_010--Hb_169574_010 Hb_048874_010 Hb_048874_010 Hb_054362_010--Hb_048874_010 Hb_005799_040 Hb_005799_040 Hb_054362_010--Hb_005799_040 Hb_008246_050 Hb_008246_050 Hb_054362_010--Hb_008246_050 Hb_162126_010 Hb_162126_010 Hb_054362_010--Hb_162126_010 Hb_127993_010--Hb_169574_010 Hb_127993_010--Hb_048874_010 Hb_127993_010--Hb_005799_040 Hb_127993_010--Hb_008246_050 Hb_127993_010--Hb_162126_010 Hb_008779_010--Hb_008643_010 Hb_001638_220 Hb_001638_220 Hb_008779_010--Hb_001638_220 Hb_008779_010--Hb_054362_010 Hb_006683_010 Hb_006683_010 Hb_008779_010--Hb_006683_010 Hb_000455_100 Hb_000455_100 Hb_008779_010--Hb_000455_100 Hb_008779_010--Hb_127993_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.53373 0 4.01592 5.73251 0

CAGE analysis