Hb_002835_260

Information

Type -
Description -
Location Contig2835: 214787-232069
Sequence    

Annotation

kegg
ID rcu:RCOM_1508860
description ATP binding protein, putative
nr
ID XP_012079985.1
description PREDICTED: uncharacterized protein LOC105640313 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KGR5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11410 PE=4 SV=1
Gene Ontology
ID GO:0005634
description octicosapeptide phox bem1p family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002835_260 0.0 - - PREDICTED: uncharacterized protein LOC105640313 [Jatropha curcas]
2 Hb_000015_180 0.1184579351 transcription factor TF Family: ERF ethylene-responsive transcription factor 3-like [Jatropha curcas]
3 Hb_011416_020 0.1338290471 - - conserved hypothetical protein [Ricinus communis]
4 Hb_011120_020 0.1431454721 - - PREDICTED: casein kinase I-like isoform X1 [Jatropha curcas]
5 Hb_000220_090 0.1473496778 - - PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Jatropha curcas]
6 Hb_000434_050 0.1483834162 transcription factor TF Family: ERF ethylene-responsive transcription factor 5 [Hevea brasiliensis]
7 Hb_136886_010 0.1499935536 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
8 Hb_001956_190 0.1512610348 - - PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas]
9 Hb_000142_010 0.1554593945 - - PREDICTED: uncharacterized protein LOC105632779 [Jatropha curcas]
10 Hb_003053_060 0.1605303715 - - PREDICTED: uncharacterized protein LOC105641515 [Jatropha curcas]
11 Hb_004324_290 0.1606579321 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor CRF4 [Jatropha curcas]
12 Hb_004787_100 0.1608470728 - - PREDICTED: transcription factor bHLH47 [Jatropha curcas]
13 Hb_158123_010 0.1611812402 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
14 Hb_006538_030 0.1619299476 - - PREDICTED: uncharacterized protein LOC105642039 [Jatropha curcas]
15 Hb_000506_140 0.1636335227 - - hypothetical protein PRUPE_ppb019425mg [Prunus persica]
16 Hb_000103_400 0.1738216416 - - PREDICTED: ATP sulfurylase 1, chloroplastic [Jatropha curcas]
17 Hb_000465_330 0.1781087828 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 5-like [Jatropha curcas]
18 Hb_000506_130 0.1784353125 - - DGCR14-related family protein [Populus trichocarpa]
19 Hb_015978_030 0.1798385006 - - Zinc finger protein GIS2 [Medicago truncatula]
20 Hb_185080_010 0.1808891502 - - -

Gene co-expression network

sample Hb_002835_260 Hb_002835_260 Hb_000015_180 Hb_000015_180 Hb_002835_260--Hb_000015_180 Hb_011416_020 Hb_011416_020 Hb_002835_260--Hb_011416_020 Hb_011120_020 Hb_011120_020 Hb_002835_260--Hb_011120_020 Hb_000220_090 Hb_000220_090 Hb_002835_260--Hb_000220_090 Hb_000434_050 Hb_000434_050 Hb_002835_260--Hb_000434_050 Hb_136886_010 Hb_136886_010 Hb_002835_260--Hb_136886_010 Hb_000015_180--Hb_000220_090 Hb_000015_180--Hb_000434_050 Hb_102100_010 Hb_102100_010 Hb_000015_180--Hb_102100_010 Hb_003038_010 Hb_003038_010 Hb_000015_180--Hb_003038_010 Hb_000015_180--Hb_011120_020 Hb_000142_010 Hb_000142_010 Hb_011416_020--Hb_000142_010 Hb_011416_020--Hb_011120_020 Hb_000003_430 Hb_000003_430 Hb_011416_020--Hb_000003_430 Hb_001956_190 Hb_001956_190 Hb_011416_020--Hb_001956_190 Hb_000506_130 Hb_000506_130 Hb_011416_020--Hb_000506_130 Hb_011120_020--Hb_000003_430 Hb_002918_150 Hb_002918_150 Hb_011120_020--Hb_002918_150 Hb_011120_020--Hb_000220_090 Hb_000220_090--Hb_003038_010 Hb_056012_010 Hb_056012_010 Hb_000220_090--Hb_056012_010 Hb_000803_060 Hb_000803_060 Hb_000220_090--Hb_000803_060 Hb_000220_090--Hb_102100_010 Hb_000220_090--Hb_000434_050 Hb_185080_010 Hb_185080_010 Hb_000434_050--Hb_185080_010 Hb_078901_010 Hb_078901_010 Hb_000434_050--Hb_078901_010 Hb_000805_150 Hb_000805_150 Hb_000434_050--Hb_000805_150 Hb_010589_130 Hb_010589_130 Hb_000434_050--Hb_010589_130 Hb_000960_010 Hb_000960_010 Hb_136886_010--Hb_000960_010 Hb_127819_010 Hb_127819_010 Hb_136886_010--Hb_127819_010 Hb_000465_330 Hb_000465_330 Hb_136886_010--Hb_000465_330 Hb_136886_010--Hb_000015_180 Hb_002217_270 Hb_002217_270 Hb_136886_010--Hb_002217_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.473151 13.6932 1.39498 2.81935 0.321923 0.242257
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.842167 0.873275 0.112308 0.482094 0.24994

CAGE analysis