Hb_000465_330

Information

Type transcription factor
Description TF Family: ERF
Location Contig465: 291451-292479
Sequence    

Annotation

kegg
ID rcu:RCOM_0273420
description Ethylene-responsive transcription factor, putative
nr
ID XP_012070058.1
description PREDICTED: ethylene-responsive transcription factor 5-like [Jatropha curcas]
swissprot
ID Q8VZ91
description Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2
trembl
ID A0A067L5Z5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03451 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000465_330 0.0 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 5-like [Jatropha curcas]
2 Hb_002311_490 0.1073964605 - - PREDICTED: RING-H2 finger protein ATL2 [Jatropha curcas]
3 Hb_000506_140 0.1115365644 - - hypothetical protein PRUPE_ppb019425mg [Prunus persica]
4 Hb_158123_010 0.1173445293 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
5 Hb_016404_010 0.119716962 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
6 Hb_000796_200 0.1310879176 - - PREDICTED: probable glycerol-3-phosphate acyltransferase 3 [Jatropha curcas]
7 Hb_121913_010 0.1374636341 - - Disease resistance protein RPS5, putative [Ricinus communis]
8 Hb_000563_460 0.1455665808 - - PREDICTED: RING-H2 finger protein ATL2 [Jatropha curcas]
9 Hb_136886_010 0.146122745 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
10 Hb_006483_050 0.1556607858 - - PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Jatropha curcas]
11 Hb_136027_010 0.1616924343 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_26658 [Jatropha curcas]
12 Hb_127628_010 0.1619864926 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
13 Hb_000434_050 0.1635718436 transcription factor TF Family: ERF ethylene-responsive transcription factor 5 [Hevea brasiliensis]
14 Hb_035391_010 0.1636068247 - - TMV resistance protein N, putative [Ricinus communis]
15 Hb_185080_010 0.1671879765 - - -
16 Hb_011287_020 0.1700980237 - - ATP binding protein, putative [Ricinus communis]
17 Hb_025477_030 0.1721201807 transcription factor TF Family: ERF dehydration-responsive element-binding protein 2 [Manihot esculenta]
18 Hb_000016_220 0.1742496035 transcription factor TF Family: AP2 CRT/DRE binding factor 1 [Hevea brasiliensis]
19 Hb_003053_060 0.1767453745 - - PREDICTED: uncharacterized protein LOC105641515 [Jatropha curcas]
20 Hb_174829_040 0.1775849615 - - PREDICTED: probable calcium-binding protein CML45 [Jatropha curcas]

Gene co-expression network

sample Hb_000465_330 Hb_000465_330 Hb_002311_490 Hb_002311_490 Hb_000465_330--Hb_002311_490 Hb_000506_140 Hb_000506_140 Hb_000465_330--Hb_000506_140 Hb_158123_010 Hb_158123_010 Hb_000465_330--Hb_158123_010 Hb_016404_010 Hb_016404_010 Hb_000465_330--Hb_016404_010 Hb_000796_200 Hb_000796_200 Hb_000465_330--Hb_000796_200 Hb_121913_010 Hb_121913_010 Hb_000465_330--Hb_121913_010 Hb_002311_490--Hb_000506_140 Hb_000563_460 Hb_000563_460 Hb_002311_490--Hb_000563_460 Hb_002311_490--Hb_158123_010 Hb_174829_040 Hb_174829_040 Hb_002311_490--Hb_174829_040 Hb_035391_010 Hb_035391_010 Hb_002311_490--Hb_035391_010 Hb_000506_140--Hb_000796_200 Hb_000506_140--Hb_016404_010 Hb_000506_130 Hb_000506_130 Hb_000506_140--Hb_000506_130 Hb_116349_090 Hb_116349_090 Hb_000506_140--Hb_116349_090 Hb_006483_050 Hb_006483_050 Hb_158123_010--Hb_006483_050 Hb_000210_150 Hb_000210_150 Hb_158123_010--Hb_000210_150 Hb_011287_020 Hb_011287_020 Hb_158123_010--Hb_011287_020 Hb_158123_010--Hb_035391_010 Hb_136027_010 Hb_136027_010 Hb_016404_010--Hb_136027_010 Hb_005568_060 Hb_005568_060 Hb_016404_010--Hb_005568_060 Hb_016404_010--Hb_000796_200 Hb_016404_010--Hb_002311_490 Hb_012423_020 Hb_012423_020 Hb_000796_200--Hb_012423_020 Hb_000796_200--Hb_011287_020 Hb_000796_200--Hb_116349_090 Hb_000796_200--Hb_136027_010 Hb_121913_010--Hb_158123_010 Hb_121913_010--Hb_136027_010 Hb_121913_010--Hb_035391_010 Hb_114932_010 Hb_114932_010 Hb_121913_010--Hb_114932_010 Hb_003582_020 Hb_003582_020 Hb_121913_010--Hb_003582_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
68.4531 1411.73 143.986 269.842 14.5479 25.229
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.2268 7.96293 7.37744 2.61263 10.1723

CAGE analysis