Hb_002639_070

Information

Type -
Description -
Location Contig2639: 69524-69742
Sequence    

Annotation

kegg
ID tcc:TCM_047068
description hypothetical protein
nr
ID XP_012073693.1
description PREDICTED: uncharacterized protein LOC105635265 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KL49
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08138 PE=4 SV=1
Gene Ontology
ID GO:0005739
description PREDICTED: uncharacterized protein LOC105635265

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002639_070 0.0 - - PREDICTED: uncharacterized protein LOC105635265 [Jatropha curcas]
2 Hb_001712_050 0.1910223124 - - PREDICTED: uncharacterized protein LOC105641944 [Jatropha curcas]
3 Hb_144898_010 0.1952821789 - - PREDICTED: 60S ribosomal protein L7-2-like [Jatropha curcas]
4 Hb_000107_140 0.2057422726 - - -
5 Hb_001513_020 0.2066926548 - - PREDICTED: methionine aminopeptidase 1A isoform X1 [Jatropha curcas]
6 Hb_005511_060 0.2156018175 - - conserved hypothetical protein [Ricinus communis]
7 Hb_005305_060 0.2189884329 - - hypothetical protein MIMGU_mgv1a015111mg [Erythranthe guttata]
8 Hb_001722_020 0.2198885871 - - -
9 Hb_003376_170 0.2227979803 - - PREDICTED: uncharacterized protein LOC105642198 isoform X2 [Jatropha curcas]
10 Hb_027295_040 0.231385712 - - hypothetical protein MIMGU_mgv1a017500mg [Erythranthe guttata]
11 Hb_001675_060 0.2346762873 - - PREDICTED: dynein light chain 1, cytoplasmic-like [Jatropha curcas]
12 Hb_000331_500 0.2409665253 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
13 Hb_005054_070 0.2412696731 - - unnamed protein product [Vitis vinifera]
14 Hb_002188_100 0.2450502121 - - conserved hypothetical protein [Ricinus communis]
15 Hb_134310_020 0.2476885022 - - PREDICTED: putative cytochrome c oxidase subunit 5C-4-like [Citrus sinensis]
16 Hb_027445_060 0.2477559027 - - PREDICTED: pescadillo homolog isoform X1 [Jatropha curcas]
17 Hb_001922_040 0.2504157672 - - reticulon family protein [Populus trichocarpa]
18 Hb_004669_040 0.2510929264 - - ATPase inhibitor, putative [Ricinus communis]
19 Hb_012807_080 0.2511855866 - - hypothetical protein CICLE_v10028099mg [Citrus clementina]
20 Hb_025299_010 0.2529440683 - - hypothetical protein JCGZ_01062 [Jatropha curcas]

Gene co-expression network

sample Hb_002639_070 Hb_002639_070 Hb_001712_050 Hb_001712_050 Hb_002639_070--Hb_001712_050 Hb_144898_010 Hb_144898_010 Hb_002639_070--Hb_144898_010 Hb_000107_140 Hb_000107_140 Hb_002639_070--Hb_000107_140 Hb_001513_020 Hb_001513_020 Hb_002639_070--Hb_001513_020 Hb_005511_060 Hb_005511_060 Hb_002639_070--Hb_005511_060 Hb_005305_060 Hb_005305_060 Hb_002639_070--Hb_005305_060 Hb_001712_050--Hb_001513_020 Hb_001712_050--Hb_005305_060 Hb_001922_040 Hb_001922_040 Hb_001712_050--Hb_001922_040 Hb_071923_010 Hb_071923_010 Hb_001712_050--Hb_071923_010 Hb_000612_070 Hb_000612_070 Hb_001712_050--Hb_000612_070 Hb_144898_010--Hb_000107_140 Hb_181320_010 Hb_181320_010 Hb_144898_010--Hb_181320_010 Hb_144898_010--Hb_005305_060 Hb_001722_020 Hb_001722_020 Hb_144898_010--Hb_001722_020 Hb_005054_070 Hb_005054_070 Hb_144898_010--Hb_005054_070 Hb_012807_080 Hb_012807_080 Hb_144898_010--Hb_012807_080 Hb_000622_100 Hb_000622_100 Hb_000107_140--Hb_000622_100 Hb_073367_010 Hb_073367_010 Hb_000107_140--Hb_073367_010 Hb_011174_010 Hb_011174_010 Hb_000107_140--Hb_011174_010 Hb_004117_180 Hb_004117_180 Hb_000107_140--Hb_004117_180 Hb_004607_120 Hb_004607_120 Hb_000107_140--Hb_004607_120 Hb_001477_010 Hb_001477_010 Hb_001513_020--Hb_001477_010 Hb_001675_060 Hb_001675_060 Hb_001513_020--Hb_001675_060 Hb_005016_150 Hb_005016_150 Hb_001513_020--Hb_005016_150 Hb_000256_270 Hb_000256_270 Hb_001513_020--Hb_000256_270 Hb_001668_030 Hb_001668_030 Hb_001513_020--Hb_001668_030 Hb_000696_350 Hb_000696_350 Hb_005511_060--Hb_000696_350 Hb_025814_010 Hb_025814_010 Hb_005511_060--Hb_025814_010 Hb_000045_070 Hb_000045_070 Hb_005511_060--Hb_000045_070 Hb_000295_100 Hb_000295_100 Hb_005511_060--Hb_000295_100 Hb_095831_010 Hb_095831_010 Hb_005511_060--Hb_095831_010 Hb_083043_010 Hb_083043_010 Hb_005511_060--Hb_083043_010 Hb_000329_770 Hb_000329_770 Hb_005305_060--Hb_000329_770 Hb_027445_060 Hb_027445_060 Hb_005305_060--Hb_027445_060 Hb_005305_060--Hb_001722_020 Hb_115919_010 Hb_115919_010 Hb_005305_060--Hb_115919_010 Hb_005965_010 Hb_005965_010 Hb_005305_060--Hb_005965_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.9627 0.792834 0.55635 18.038 69.1534 116.179
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.9441 34.3685 2.7672 4.12848 0.969039

CAGE analysis