Hb_002186_070

Information

Type -
Description -
Location Contig2186: 94519-96492
Sequence    

Annotation

kegg
ID rcu:RCOM_0818920
description kinase, putative (EC:2.7.11.21)
nr
ID XP_002518350.1
description kinase, putative [Ricinus communis]
swissprot
ID Q9LXA5
description L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1
trembl
ID B9RX81
description Kinase, putative OS=Ricinus communis GN=RCOM_0818920 PE=3 SV=1
Gene Ontology
ID GO:0004674
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002186_070 0.0 - - kinase, putative [Ricinus communis]
2 Hb_021409_140 0.186743967 - - PREDICTED: trehalase isoform X1 [Jatropha curcas]
3 Hb_000707_010 0.1956119673 - - hypothetical protein JCGZ_25098 [Jatropha curcas]
4 Hb_003086_010 0.2041999429 - - hypothetical protein JCGZ_06093 [Jatropha curcas]
5 Hb_117639_010 0.2065869214 - - hypothetical protein B456_013G070100 [Gossypium raimondii]
6 Hb_134911_010 0.2079523023 - - conserved hypothetical protein [Ricinus communis]
7 Hb_008143_040 0.2172625676 - - Alpha-expansin 4 precursor, putative [Ricinus communis]
8 Hb_000720_090 0.2184785247 transcription factor TF Family: MYB myb, putative [Ricinus communis]
9 Hb_010672_080 0.2232090927 transcription factor TF Family: MYB hypothetical protein JCGZ_00902 [Jatropha curcas]
10 Hb_000057_100 0.2320696544 - - Peroxidase 57 precursor, putative [Ricinus communis]
11 Hb_015978_010 0.2350984424 - - PREDICTED: probable beta-D-xylosidase 2 [Populus euphratica]
12 Hb_000116_120 0.2363439246 - - PREDICTED: disease resistance response protein 206-like [Jatropha curcas]
13 Hb_004218_310 0.2380857021 - - PREDICTED: NADPH:quinone oxidoreductase-like [Camelina sativa]
14 Hb_006916_020 0.2388446818 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
15 Hb_172426_050 0.2421499046 - - PREDICTED: uncharacterized protein LOC105634266 [Jatropha curcas]
16 Hb_000753_180 0.2431384829 - - PREDICTED: dirigent protein 22-like [Jatropha curcas]
17 Hb_001195_750 0.2466340098 - - PREDICTED: protein TRANSPARENT TESTA 12 [Jatropha curcas]
18 Hb_000609_020 0.2488651882 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
19 Hb_007134_030 0.2502800614 - - PREDICTED: probable serine/threonine-protein kinase At4g35230 [Jatropha curcas]
20 Hb_000000_200 0.2504064496 - - PREDICTED: protein TRANSPARENT TESTA 12 [Jatropha curcas]

Gene co-expression network

sample Hb_002186_070 Hb_002186_070 Hb_021409_140 Hb_021409_140 Hb_002186_070--Hb_021409_140 Hb_000707_010 Hb_000707_010 Hb_002186_070--Hb_000707_010 Hb_003086_010 Hb_003086_010 Hb_002186_070--Hb_003086_010 Hb_117639_010 Hb_117639_010 Hb_002186_070--Hb_117639_010 Hb_134911_010 Hb_134911_010 Hb_002186_070--Hb_134911_010 Hb_008143_040 Hb_008143_040 Hb_002186_070--Hb_008143_040 Hb_000186_290 Hb_000186_290 Hb_021409_140--Hb_000186_290 Hb_000116_120 Hb_000116_120 Hb_021409_140--Hb_000116_120 Hb_021409_140--Hb_000707_010 Hb_000720_090 Hb_000720_090 Hb_021409_140--Hb_000720_090 Hb_021409_140--Hb_003086_010 Hb_172426_050 Hb_172426_050 Hb_021409_140--Hb_172426_050 Hb_000707_010--Hb_000720_090 Hb_000707_010--Hb_134911_010 Hb_000077_400 Hb_000077_400 Hb_000707_010--Hb_000077_400 Hb_000042_380 Hb_000042_380 Hb_000707_010--Hb_000042_380 Hb_001439_040 Hb_001439_040 Hb_000707_010--Hb_001439_040 Hb_003086_010--Hb_172426_050 Hb_003086_010--Hb_000116_120 Hb_003086_010--Hb_000720_090 Hb_078081_010 Hb_078081_010 Hb_003086_010--Hb_078081_010 Hb_001405_150 Hb_001405_150 Hb_003086_010--Hb_001405_150 Hb_000057_100 Hb_000057_100 Hb_117639_010--Hb_000057_100 Hb_007875_020 Hb_007875_020 Hb_117639_010--Hb_007875_020 Hb_000337_030 Hb_000337_030 Hb_117639_010--Hb_000337_030 Hb_022250_160 Hb_022250_160 Hb_117639_010--Hb_022250_160 Hb_117639_010--Hb_008143_040 Hb_005663_090 Hb_005663_090 Hb_117639_010--Hb_005663_090 Hb_134911_010--Hb_117639_010 Hb_134911_010--Hb_000077_400 Hb_134911_010--Hb_001439_040 Hb_134911_010--Hb_000057_100 Hb_134911_010--Hb_000720_090 Hb_007416_290 Hb_007416_290 Hb_008143_040--Hb_007416_290 Hb_009545_030 Hb_009545_030 Hb_008143_040--Hb_009545_030 Hb_007134_030 Hb_007134_030 Hb_008143_040--Hb_007134_030 Hb_008143_040--Hb_000057_100 Hb_000115_250 Hb_000115_250 Hb_008143_040--Hb_000115_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0099947 0.0622358 0.0968303 0.0188633 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0360343 0 0.172054 0.0761241

CAGE analysis