Hb_001534_060

Information

Type -
Description -
Location Contig1534: 49444-61150
Sequence    

Annotation

kegg
ID rcu:RCOM_1353150
description UDP-glucosyltransferase, putative (EC:2.4.1.115)
nr
ID XP_012082495.1
description PREDICTED: UDP-glycosyltransferase 73C3 [Jatropha curcas]
swissprot
ID Q9ZQ99
description UDP-glycosyltransferase 73C1 OS=Arabidopsis thaliana GN=UGT73C1 PE=2 SV=1
trembl
ID A0A0E0MS31
description Uncharacterized protein OS=Oryza rufipogon PE=4 SV=1
Gene Ontology
ID GO:0047213
description udp-glycosyltransferase 73c3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13186: 49739-50256
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001534_060 0.0 - - PREDICTED: UDP-glycosyltransferase 73C3 [Jatropha curcas]
2 Hb_000731_150 0.0578231456 - - PREDICTED: cytochrome P450 77A1 [Jatropha curcas]
3 Hb_011724_040 0.0601390825 - - PREDICTED: uncharacterized protein LOC105632860 [Jatropha curcas]
4 Hb_002328_080 0.0667582573 - - short-chain dehydrogenase, putative [Ricinus communis]
5 Hb_000512_120 0.0687289297 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription factor NGA1-like [Jatropha curcas]
6 Hb_009707_020 0.0701887277 - - PREDICTED: 3-ketoacyl-CoA synthase 12 [Jatropha curcas]
7 Hb_068580_010 0.0704730901 - - PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 isoform X2 [Populus euphratica]
8 Hb_000333_010 0.0714902394 - - hypothetical protein POPTR_0006s14510g [Populus trichocarpa]
9 Hb_001205_220 0.0725235733 - - conserved hypothetical protein [Ricinus communis]
10 Hb_003086_140 0.0733250639 transcription factor TF Family: C2C2-YABBY PREDICTED: protein YABBY 6-like isoform X2 [Jatropha curcas]
11 Hb_003734_070 0.074147029 - - chlorophyll A/B binding protein, putative [Ricinus communis]
12 Hb_007187_010 0.076861937 - - hypothetical protein JCGZ_09061 [Jatropha curcas]
13 Hb_000844_080 0.0782017995 transcription factor TF Family: G2-like hypothetical protein RCOM_1592640 [Ricinus communis]
14 Hb_011382_010 0.0783460765 - - hypothetical protein CICLE_v10028106mg [Citrus clementina]
15 Hb_002743_010 0.0788070969 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001507_060 0.0793340608 - - translation initiation factor eif-2b gamma subunit, putative [Ricinus communis]
17 Hb_000010_160 0.0794989441 - - Uncharacterized protein TCM_014508 [Theobroma cacao]
18 Hb_004032_400 0.0804660413 - - PREDICTED: uncharacterized transporter YBR287W-like [Jatropha curcas]
19 Hb_033187_010 0.0812913479 - - epoxide hydrolase, putative [Ricinus communis]
20 Hb_001295_070 0.0820153439 - - PREDICTED: putative UPF0481 protein At3g02645 [Jatropha curcas]

Gene co-expression network

sample Hb_001534_060 Hb_001534_060 Hb_000731_150 Hb_000731_150 Hb_001534_060--Hb_000731_150 Hb_011724_040 Hb_011724_040 Hb_001534_060--Hb_011724_040 Hb_002328_080 Hb_002328_080 Hb_001534_060--Hb_002328_080 Hb_000512_120 Hb_000512_120 Hb_001534_060--Hb_000512_120 Hb_009707_020 Hb_009707_020 Hb_001534_060--Hb_009707_020 Hb_068580_010 Hb_068580_010 Hb_001534_060--Hb_068580_010 Hb_001205_220 Hb_001205_220 Hb_000731_150--Hb_001205_220 Hb_004993_020 Hb_004993_020 Hb_000731_150--Hb_004993_020 Hb_002743_010 Hb_002743_010 Hb_000731_150--Hb_002743_010 Hb_000557_070 Hb_000557_070 Hb_000731_150--Hb_000557_070 Hb_001519_140 Hb_001519_140 Hb_000731_150--Hb_001519_140 Hb_000731_150--Hb_068580_010 Hb_002534_020 Hb_002534_020 Hb_011724_040--Hb_002534_020 Hb_003632_020 Hb_003632_020 Hb_011724_040--Hb_003632_020 Hb_006132_080 Hb_006132_080 Hb_011724_040--Hb_006132_080 Hb_002121_050 Hb_002121_050 Hb_011724_040--Hb_002121_050 Hb_033187_010 Hb_033187_010 Hb_011724_040--Hb_033187_010 Hb_002328_080--Hb_009707_020 Hb_000844_080 Hb_000844_080 Hb_002328_080--Hb_000844_080 Hb_001507_060 Hb_001507_060 Hb_002328_080--Hb_001507_060 Hb_001295_070 Hb_001295_070 Hb_002328_080--Hb_001295_070 Hb_001775_020 Hb_001775_020 Hb_002328_080--Hb_001775_020 Hb_000010_160 Hb_000010_160 Hb_002328_080--Hb_000010_160 Hb_000333_010 Hb_000333_010 Hb_000512_120--Hb_000333_010 Hb_007187_010 Hb_007187_010 Hb_000512_120--Hb_007187_010 Hb_011382_010 Hb_011382_010 Hb_000512_120--Hb_011382_010 Hb_000512_120--Hb_009707_020 Hb_014056_020 Hb_014056_020 Hb_000512_120--Hb_014056_020 Hb_000512_120--Hb_002743_010 Hb_009707_020--Hb_011382_010 Hb_009707_020--Hb_007187_010 Hb_009707_020--Hb_000844_080 Hb_009707_020--Hb_000010_160 Hb_009707_020--Hb_001775_020 Hb_068580_010--Hb_004993_020 Hb_003734_070 Hb_003734_070 Hb_068580_010--Hb_003734_070 Hb_068580_010--Hb_000557_070 Hb_000077_020 Hb_000077_020 Hb_068580_010--Hb_000077_020 Hb_004880_020 Hb_004880_020 Hb_068580_010--Hb_004880_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0204469 0.0873399 12.5854 7.25203 0 0.0384895
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0984166 0.0774507 0.033052 0.068172 17.6279

CAGE analysis